BLASTX nr result

ID: Cimicifuga21_contig00029005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029005
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38700.3| unnamed protein product [Vitis vinifera]              202   5e-50
ref|XP_002264721.1| PREDICTED: 3-ketoacyl-CoA synthase 1-like [V...   201   2e-49
gb|ABX10440.1| 3-ketoacyl-CoA synthase 10 [Gossypium hirsutum]        194   2e-47
ref|NP_171620.2| 3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana...   181   2e-43
ref|XP_002889383.1| 3-ketoacyl-CoA synthase 1 [Arabidopsis lyrat...   181   2e-43

>emb|CBI38700.3| unnamed protein product [Vitis vinifera]
          Length = 714

 Score =  202 bits (515), Expect = 5e-50
 Identities = 100/171 (58%), Positives = 130/171 (76%)
 Frame = +3

Query: 288 VLDMENIEMENERLTAEMAYVDSSSAVIRIRRSLPDFLKSVKLKYVKLGYRLTCDYATLF 467
           VL M +IEM+ ERLTAEMA+ DSSS VI+IR+ LPDFL+SVKLKYVKLGY  +C+ AT+ 
Sbjct: 41  VLFMGSIEMDKERLTAEMAFKDSSSVVIKIRQKLPDFLQSVKLKYVKLGYGYSCNAATVL 100

Query: 468 RYGVLLPLFVAICYRLAALQINRISELWSARVVQLDSGTXXXXXXXXXXXXXXXXXKRPR 647
           ++GV+LPL VA   ++  L+ + +S+LW++R + +D+ T                 KRP 
Sbjct: 101 KFGVVLPLLVATVVQITGLRFDDVSDLWTSRALLVDTATAVTGSAVLLFLLGVYWAKRPS 160

Query: 648 PVYLVDFACYKPENERKMSIESFLKMTEENGAFQEETIQFQKRISSRSGLG 800
           PVYLVDFACYKPE+ RKMS+ESFL+MTEENG F+EET+QFQ+RIS+RSGLG
Sbjct: 161 PVYLVDFACYKPEDGRKMSVESFLEMTEENGKFEEETVQFQRRISTRSGLG 211


>ref|XP_002264721.1| PREDICTED: 3-ketoacyl-CoA synthase 1-like [Vitis vinifera]
          Length = 530

 Score =  201 bits (510), Expect = 2e-49
 Identities = 98/168 (58%), Positives = 128/168 (76%)
 Frame = +3

Query: 297 MENIEMENERLTAEMAYVDSSSAVIRIRRSLPDFLKSVKLKYVKLGYRLTCDYATLFRYG 476
           M +IEM+ ERLTAEMA+ DSSS VI+IR+ LPDFL+SVKLKYVKLGY  +C+ AT+ ++G
Sbjct: 1   MGSIEMDKERLTAEMAFKDSSSVVIKIRQKLPDFLQSVKLKYVKLGYGYSCNAATVLKFG 60

Query: 477 VLLPLFVAICYRLAALQINRISELWSARVVQLDSGTXXXXXXXXXXXXXXXXXKRPRPVY 656
           V+LPL VA   ++  L+ + +S+LW++R + +D+ T                 KRP PVY
Sbjct: 61  VVLPLLVATVVQITGLRFDDVSDLWTSRALLVDTATAVTGSAVLLFLLGVYWAKRPSPVY 120

Query: 657 LVDFACYKPENERKMSIESFLKMTEENGAFQEETIQFQKRISSRSGLG 800
           LVDFACYKPE+ RKMS+ESFL+MTEENG F+EET+QFQ+RIS+RSGLG
Sbjct: 121 LVDFACYKPEDGRKMSVESFLEMTEENGKFEEETVQFQRRISTRSGLG 168


>gb|ABX10440.1| 3-ketoacyl-CoA synthase 10 [Gossypium hirsutum]
          Length = 531

 Score =  194 bits (492), Expect = 2e-47
 Identities = 96/173 (55%), Positives = 129/173 (74%), Gaps = 3/173 (1%)
 Frame = +3

Query: 291 LDMENIEMENERLTAEMAYVDSSSAVIRIRRSLPDFLKSVKLKYVKLGYRLTCDYATLFR 470
           +D ++IEM+ ERLTAEMA+ DSSSAVI+IR+ LPDFL+SVKLKYVKLGY  +C+ AT+  
Sbjct: 1   MDRDSIEMDKERLTAEMAFKDSSSAVIKIRKRLPDFLQSVKLKYVKLGYGYSCNPATVLM 60

Query: 471 YGVLLPLFVAICYRLAALQINRISELW---SARVVQLDSGTXXXXXXXXXXXXXXXXXKR 641
           + +++PLFV    +   L+++ +SELW   + R+  +D+ T                 KR
Sbjct: 61  FALIVPLFVVTAVQFTGLKLDGVSELWTNQALRLESIDAATRLAGSLILFFLFGLYYAKR 120

Query: 642 PRPVYLVDFACYKPENERKMSIESFLKMTEENGAFQEETIQFQKRISSRSGLG 800
            RPVYLVDFACYKPE++RKMS++SFLKMTE++GAF EET+QFQ+RIS+RSGLG
Sbjct: 121 SRPVYLVDFACYKPEDDRKMSVDSFLKMTEDSGAFTEETLQFQRRISTRSGLG 173


>ref|NP_171620.2| 3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana]
           gi|75192344|sp|Q9MAM3.1|KCS1_ARATH RecName:
           Full=3-ketoacyl-CoA synthase 1; Short=KCS-1; AltName:
           Full=Very long-chain fatty acid condensing enzyme 1;
           Short=VLCFA condensing enzyme 1
           gi|6715643|gb|AAF26470.1|AC007323_11 T25K16.11
           [Arabidopsis thaliana] gi|18377664|gb|AAL66982.1|
           putative fatty acid elongase 3-ketoacyl-CoA synthase 1
           [Arabidopsis thaliana] gi|20465993|gb|AAM20218.1|
           putative fatty acid elongase 3-ketoacyl-CoA synthase 1
           [Arabidopsis thaliana] gi|332189120|gb|AEE27241.1|
           3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana]
          Length = 528

 Score =  181 bits (458), Expect = 2e-43
 Identities = 91/166 (54%), Positives = 118/166 (71%)
 Frame = +3

Query: 303 NIEMENERLTAEMAYVDSSSAVIRIRRSLPDFLKSVKLKYVKLGYRLTCDYATLFRYGVL 482
           +IEM+ ERLTAEMA+ DSSSAVIRIRR LPD L SVKLKYVKLG   +C+  T+  + ++
Sbjct: 6   SIEMDRERLTAEMAFRDSSSAVIRIRRRLPDLLTSVKLKYVKLGLHNSCNVTTILFFLII 65

Query: 483 LPLFVAICYRLAALQINRISELWSARVVQLDSGTXXXXXXXXXXXXXXXXXKRPRPVYLV 662
           LPL   +  +L  L  +  SELWS + VQLD+ T                  R +PVYLV
Sbjct: 66  LPLTGTVLVQLTGLTFDTFSELWSNQAVQLDTATRLTCLVFLSFVLTLYVANRSKPVYLV 125

Query: 663 DFACYKPENERKMSIESFLKMTEENGAFQEETIQFQKRISSRSGLG 800
           DF+CYKPE+ERK+S++SFL MTEENG+F ++T+QFQ+RIS+R+GLG
Sbjct: 126 DFSCYKPEDERKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLG 171


>ref|XP_002889383.1| 3-ketoacyl-CoA synthase 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297335225|gb|EFH65642.1| 3-ketoacyl-CoA synthase 1
           [Arabidopsis lyrata subsp. lyrata]
          Length = 528

 Score =  181 bits (458), Expect = 2e-43
 Identities = 91/166 (54%), Positives = 118/166 (71%)
 Frame = +3

Query: 303 NIEMENERLTAEMAYVDSSSAVIRIRRSLPDFLKSVKLKYVKLGYRLTCDYATLFRYGVL 482
           +IEM+ ERLTAEMA+ DSSSAVIRIRR LPD L SVKLKYVKLG   +C+  T+  + ++
Sbjct: 6   SIEMDRERLTAEMAFRDSSSAVIRIRRRLPDLLTSVKLKYVKLGLHNSCNLTTILFFLII 65

Query: 483 LPLFVAICYRLAALQINRISELWSARVVQLDSGTXXXXXXXXXXXXXXXXXKRPRPVYLV 662
           LPL   +  +L  L  +  SELWS + VQLD+ T                  R +PVYLV
Sbjct: 66  LPLTGTVLVQLTGLTFDTFSELWSNQAVQLDTATRLTCLVFLCFVLTLYVANRTKPVYLV 125

Query: 663 DFACYKPENERKMSIESFLKMTEENGAFQEETIQFQKRISSRSGLG 800
           DF+CYKPE+ERK+S++SFL MTEENG+F ++T+QFQ+RIS+R+GLG
Sbjct: 126 DFSCYKPEDERKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLG 171


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