BLASTX nr result

ID: Cimicifuga21_contig00028999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028999
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75530.1| hypothetical protein VITISV_001347 [Vitis vinifera]   120   1e-25
ref|XP_002333207.1| predicted protein [Populus trichocarpa] gi|2...   114   9e-24
ref|XP_002863477.1| hypothetical protein ARALYDRAFT_494436 [Arab...   114   2e-23
ref|NP_199361.1| uncharacterized protein [Arabidopsis thaliana] ...   111   1e-22
emb|CBI20388.3| unnamed protein product [Vitis vinifera]              109   3e-22

>emb|CAN75530.1| hypothetical protein VITISV_001347 [Vitis vinifera]
          Length = 730

 Score =  120 bits (302), Expect = 1e-25
 Identities = 67/185 (36%), Positives = 102/185 (55%), Gaps = 10/185 (5%)
 Frame = +3

Query: 3   PDYDKLMEEYMATQQI----------QRSMETESSKGMDVVLEGFPDHLDRLKIVQLAYH 152
           P+Y +LMEEY + ++           ++ + T +S   +    G P+H+  +   +  Y 
Sbjct: 181 PNYAQLMEEYSSKKEAHVPVKIIIAPEKRVSTSASSVPEEPSTG-PNHISEM---ESGYK 236

Query: 153 FFHTFKGLLVSLPLNYNDISSIQRFFVRWSANDAFRIIEIELNFMYEVLYTKASVVHSRI 332
           FF  FKGL+V L  ++ + +  ++FF       AFR+IE+ELNFMY+ LYTK  VV+ +I
Sbjct: 237 FFKIFKGLIVDLMFSFQERNDSRKFFFGMLPEKAFRVIEVELNFMYDALYTKMVVVNRKI 296

Query: 333 GYVLRXXXXXXXXXXXXXXXXHDKNRYNYLYIAITYTLFIGAVSLEAIGLFNLIFSDWSI 512
           GY LR                H K++ +   I +TY L IGA+SL+ I +  LIFSDW+I
Sbjct: 297 GYFLRFICTGCIAVALQLFSSHHKHKIHKFDIGVTYALLIGAISLDVIAIVKLIFSDWTI 356

Query: 513 IALKN 527
           + LKN
Sbjct: 357 VLLKN 361


>ref|XP_002333207.1| predicted protein [Populus trichocarpa] gi|222835096|gb|EEE73545.1|
           predicted protein [Populus trichocarpa]
          Length = 729

 Score =  114 bits (286), Expect = 9e-24
 Identities = 71/195 (36%), Positives = 104/195 (53%), Gaps = 17/195 (8%)
 Frame = +3

Query: 3   PDYDKLMEEYMATQQIQRSMETESSKGMDVVLEGFPDHL--------------DRLKIVQ 140
           P+Y KLMEEY    +I+  + TE      +++   PD                D L++VQ
Sbjct: 184 PNYAKLMEEY--DSKIEAKIPTE------IIIIEEPDKQMPTTARDTQIKKLKDDLEVVQ 235

Query: 141 LAYHFFHTFKGLLVSLPLNYNDISSIQRFFVRWSANDAFRIIEIELNFMYEVLYTKASVV 320
            AY++F+ FKGL+V L  ++ D +  ++FF    A DA +++E+ELNF+YEVL+TKA VV
Sbjct: 236 RAYYYFNIFKGLIVDLIFSFKDRNESRKFFHSIDAEDALKVLEVELNFIYEVLFTKAVVV 295

Query: 321 HSRIGYVLRXXXXXXXXXXXXXXXXHDKNR---YNYLYIAITYTLFIGAVSLEAIGLFNL 491
           HS IGYV R                  KN+   ++ L +  TY L +G+VSL+ I     
Sbjct: 296 HSVIGYVFRLLSFILVLVALALFRFIVKNKKDTFHPLDVKFTYVLLLGSVSLDTIAFVRA 355

Query: 492 IFSDWSIIALKNYSK 536
           IFSDW++  L    K
Sbjct: 356 IFSDWTVADLNKPGK 370


>ref|XP_002863477.1| hypothetical protein ARALYDRAFT_494436 [Arabidopsis lyrata subsp.
           lyrata] gi|297309312|gb|EFH39736.1| hypothetical protein
           ARALYDRAFT_494436 [Arabidopsis lyrata subsp. lyrata]
          Length = 870

 Score =  114 bits (284), Expect = 2e-23
 Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 4/178 (2%)
 Frame = +3

Query: 3   PDYDKLMEEYMATQQIQRSMET----ESSKGMDVVLEGFPDHLDRLKIVQLAYHFFHTFK 170
           P+Y KLMEEY A + ++   +     E  K      +  P+ L  L I+Q AY +F+ FK
Sbjct: 185 PNYAKLMEEYAAKKDMKMPTQIIKIGEPEKDPKASAQVRPEKLTPLNILQYAYKYFNIFK 244

Query: 171 GLLVSLPLNYNDISSIQRFFVRWSANDAFRIIEIELNFMYEVLYTKASVVHSRIGYVLRX 350
           GL+V L   +   +  +RFF    A++A RI+E+ELNF+Y  LYTKA ++H+ IG++ R 
Sbjct: 245 GLVVDLIFTFQQRAESKRFFDSLEAHEALRILEVELNFIYAALYTKAEILHNWIGFIFRF 304

Query: 351 XXXXXXXXXXXXXXXHDKNRYNYLYIAITYTLFIGAVSLEAIGLFNLIFSDWSIIALK 524
                            K  Y+   + +TY L +G ++L++I L     SDW+ + L+
Sbjct: 305 IALGCLIAALRIFQYKSKKDYSGFDVGLTYALLLGGIALDSIALIMFCASDWTFVRLR 362


>ref|NP_199361.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758738|dbj|BAB09176.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007874|gb|AED95257.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 877

 Score =  111 bits (277), Expect = 1e-22
 Identities = 63/180 (35%), Positives = 94/180 (52%), Gaps = 6/180 (3%)
 Frame = +3

Query: 3   PDYDKLMEEYMATQ------QIQRSMETESSKGMDVVLEGFPDHLDRLKIVQLAYHFFHT 164
           P+Y KLMEEY A +      QI +  E E     D  ++  PD    L I+Q AY +F+ 
Sbjct: 185 PNYAKLMEEYAAKKDMKMPTQIIKVGEPEKDPRDDAPVKP-PDGFTPLNILQYAYKYFNI 243

Query: 165 FKGLLVSLPLNYNDISSIQRFFVRWSANDAFRIIEIELNFMYEVLYTKASVVHSRIGYVL 344
           FKGL+V L   +   +  +RFF    A +A RI+E+ELNF+Y  LYTKA ++H+ IG++ 
Sbjct: 244 FKGLVVDLIFTFQQRAESKRFFDSLKAEEALRILEVELNFIYAALYTKAEILHNWIGFLF 303

Query: 345 RXXXXXXXXXXXXXXXXHDKNRYNYLYIAITYTLFIGAVSLEAIGLFNLIFSDWSIIALK 524
           R                  K  Y+   + +TY L +G ++L+ I L     SDW+ + L+
Sbjct: 304 RFIALGCLAAALRIFQYKSKKDYSGFDVGLTYALLLGGIALDCIALIMFCASDWTFVRLR 363


>emb|CBI20388.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  109 bits (273), Expect = 3e-22
 Identities = 55/128 (42%), Positives = 76/128 (59%)
 Frame = +3

Query: 144 AYHFFHTFKGLLVSLPLNYNDISSIQRFFVRWSANDAFRIIEIELNFMYEVLYTKASVVH 323
           A  FF  FKGL+V L  ++ + +  ++FF       AFR+IE+ELNFMY+ LYTK  VV+
Sbjct: 186 ASSFFKIFKGLIVDLMFSFQERNDSRKFFFGMLPEKAFRVIEVELNFMYDALYTKMVVVN 245

Query: 324 SRIGYVLRXXXXXXXXXXXXXXXXHDKNRYNYLYIAITYTLFIGAVSLEAIGLFNLIFSD 503
            +IGY LR                H K++ +   I +TY L IGA+SL+ I +  LIFSD
Sbjct: 246 RKIGYFLRFICTGCIAVALQLFSSHHKHKIHKFDIGVTYALLIGAISLDVIAIVKLIFSD 305

Query: 504 WSIIALKN 527
           W+I+ LKN
Sbjct: 306 WTIVLLKN 313


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