BLASTX nr result

ID: Cimicifuga21_contig00028984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028984
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA59488.1| TPA: hypothetical protein ZEAMMB73_156584 [Zea m...    55   6e-06
tpg|DAA59487.1| TPA: hypothetical protein ZEAMMB73_156584 [Zea m...    55   6e-06
ref|NP_001136620.1| uncharacterized protein LOC100216745 [Zea ma...    55   6e-06
gb|ADB92670.1| amino acid permease 6 [Populus tremula x Populus ...    55   8e-06
ref|XP_002301129.1| amino acid permease [Populus trichocarpa] gi...    55   8e-06

>tpg|DAA59488.1| TPA: hypothetical protein ZEAMMB73_156584 [Zea mays]
          Length = 483

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/55 (43%), Positives = 35/55 (63%)
 Frame = -3

Query: 208 LKRANCFKEQRHGVVCQISRILYVLIF*AIQVVLSQFPNMGKVIWLSYIAVTSTL 44
           +KR+NCF  + HG  C+ S    ++IF  IQ++LSQ PN  K+ WLS +A   +L
Sbjct: 151 IKRSNCFHSRGHGADCEASNTTNMIIFAGIQILLSQLPNFHKLWWLSIVAAVMSL 205


>tpg|DAA59487.1| TPA: hypothetical protein ZEAMMB73_156584 [Zea mays]
          Length = 241

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/55 (43%), Positives = 35/55 (63%)
 Frame = -3

Query: 208 LKRANCFKEQRHGVVCQISRILYVLIF*AIQVVLSQFPNMGKVIWLSYIAVTSTL 44
           +KR+NCF  + HG  C+ S    ++IF  IQ++LSQ PN  K+ WLS +A   +L
Sbjct: 151 IKRSNCFHSRGHGADCEASNTTNMIIFAGIQILLSQLPNFHKLWWLSIVAAVMSL 205


>ref|NP_001136620.1| uncharacterized protein LOC100216745 [Zea mays]
           gi|194696398|gb|ACF82283.1| unknown [Zea mays]
          Length = 483

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/55 (43%), Positives = 35/55 (63%)
 Frame = -3

Query: 208 LKRANCFKEQRHGVVCQISRILYVLIF*AIQVVLSQFPNMGKVIWLSYIAVTSTL 44
           +KR+NCF  + HG  C+ S    ++IF  IQ++LSQ PN  K+ WLS +A   +L
Sbjct: 151 IKRSNCFHSRGHGADCEASNTTNMIIFAGIQILLSQLPNFHKLWWLSIVAAVMSL 205


>gb|ADB92670.1| amino acid permease 6 [Populus tremula x Populus alba]
          Length = 483

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/50 (48%), Positives = 34/50 (68%)
 Frame = -3

Query: 208 LKRANCFKEQRHGVVCQISRILYVLIF*AIQVVLSQFPNMGKVIWLSYIA 59
           ++R+NCF +  H V CQ S   Y++IF  IQ++LSQ PN  K+ WLS +A
Sbjct: 149 VRRSNCFHKHGHAVKCQTSNNPYMIIFACIQIMLSQIPNFHKLSWLSILA 198


>ref|XP_002301129.1| amino acid permease [Populus trichocarpa]
           gi|222842855|gb|EEE80402.1| amino acid permease [Populus
           trichocarpa]
          Length = 488

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/50 (48%), Positives = 34/50 (68%)
 Frame = -3

Query: 208 LKRANCFKEQRHGVVCQISRILYVLIF*AIQVVLSQFPNMGKVIWLSYIA 59
           ++R+NCF +  H V CQ S   Y++IF  IQ++LSQ PN  K+ WLS +A
Sbjct: 151 VRRSNCFHKHGHAVKCQTSNNPYMIIFACIQIMLSQIPNFHKLSWLSILA 200


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