BLASTX nr result

ID: Cimicifuga21_contig00028944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028944
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                   80   2e-13
ref|XP_003547623.1| PREDICTED: uncharacterized protein LOC100783...    77   1e-12
ref|XP_003533074.1| PREDICTED: uncharacterized protein LOC100805...    73   2e-11
ref|XP_003543693.1| PREDICTED: uncharacterized protein LOC100792...    70   2e-10
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...    68   7e-10

>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 62/173 (35%), Positives = 83/173 (47%), Gaps = 10/173 (5%)
 Frame = -2

Query: 492  ETLLYSTHTLQQAKIMEERQKTQHMPSMSFFTXXXXXXXXXXXXXXXQLLTHQAQFQLQL 313
            +T  +  H LQQ K+  ++Q  Q  P++                   Q+ +   Q Q QL
Sbjct: 487  QTNQHPAHMLQQPKVPLQQQMQQSAPNLLPNQGQQQQSQPQQQQMMSQIQSQPTQLQQQL 546

Query: 312  GSQNKLNVLQRDMNQRMHAS-----SLLQNQNTIEXXXXXXXXXXRPSEASSNSLAPNAE 148
            G Q + N LQRDM QR+ AS     SLLQ QN ++             E SS SL    +
Sbjct: 547  GLQQQPNPLQRDMQQRLQASGQASASLLQPQNVMDQQKQLYQPQRALPETSSTSLDSTHQ 606

Query: 147  T---NAVDRREAVHQKIKSMKEMYMPLLLSIQKKFINSLQ--NSRAQTTNSEQ 4
            T   N VD +E V+QKIKSMKEMY+P L  + +K    LQ  +S  Q   S+Q
Sbjct: 607  TGQANGVDWQEEVYQKIKSMKEMYLPELNEMYQKIAAKLQQHDSLPQQPKSDQ 659


>ref|XP_003547623.1| PREDICTED: uncharacterized protein LOC100783762 [Glycine max]
          Length = 1313

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 6/169 (3%)
 Frame = -2

Query: 492 ETLLYSTHTLQQAKIMEERQKTQHMPSMSFFTXXXXXXXXXXXXXXXQLLTHQAQFQLQL 313
           +T  +S H LQQ+++  ++Q  Q+  ++                   Q+ +  AQ Q QL
Sbjct: 427 QTSQHSAHVLQQSQVPIQQQSQQNASNLLPSQVQQSQPQAPQQQLMPQIQSQPAQLQQQL 486

Query: 312 GSQNKLNVLQRDMNQRMHASS-LLQNQNTIEXXXXXXXXXXRPSEASSNSLAPNAET--- 145
           G Q + N LQRDM QR+ AS  LLQ  N ++             E SS SL   A+T   
Sbjct: 487 GLQQQPNPLQRDMQQRLQASGPLLQQSNVLDQQKQLYQSQRPLPETSSTSLDSTAQTGQS 546

Query: 144 NAVDRREAVHQKIKSMKEMYMPLLLSIQKKFINSLQ--NSRAQTTNSEQ 4
           +  D +E V+QKIKSMKE Y+P L  + +K  + LQ  +S  Q   S+Q
Sbjct: 547 SGGDWQEEVYQKIKSMKESYLPELNEMYQKIASKLQQHDSLPQQPKSDQ 595


>ref|XP_003533074.1| PREDICTED: uncharacterized protein LOC100805336 [Glycine max]
          Length = 1304

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
 Frame = -2

Query: 492 ETLLYSTHTLQQAKIMEERQKTQHMPSMSFFTXXXXXXXXXXXXXXXQLLTHQAQFQLQL 313
           +T  +S H LQQ K+  ++Q  Q   ++                   Q+ T  AQ Q QL
Sbjct: 418 QTSHHSAHMLQQPKVPMQQQSQQSTSNLLLPHSQQSQPLGSQQQLMPQIHTQSAQLQQQL 477

Query: 312 GSQNKLNVLQRDMNQRMHAS-SLLQNQNTIEXXXXXXXXXXRPSEASSNSL---APNAET 145
           G   +LN  QRDM QR+ AS SLLQ QN ++             E S+ SL      A+ 
Sbjct: 478 GLPQQLNPSQRDMQQRIQASGSLLQQQNVLDQQKQLYQTQRTLPETSATSLDSTTQTAQL 537

Query: 144 NAVDRREAVHQKIKSMKEMYMPLLLSIQKKFINSL 40
           +  D +E V+QK+++MKE Y+P +  + +K  N L
Sbjct: 538 SGADWQEEVYQKLQTMKESYLPEMNEMYQKIANKL 572


>ref|XP_003543693.1| PREDICTED: uncharacterized protein LOC100792913 [Glycine max]
          Length = 1324

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/116 (41%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
 Frame = -2

Query: 333 AQFQLQLGSQNKLNVLQRDMNQRMHASS-LLQNQNTIEXXXXXXXXXXRPSEASSNSLAP 157
           AQ Q QLG Q + N LQRD+ QR+ AS  LLQ  N ++             E SS SL  
Sbjct: 483 AQLQQQLGLQQQPNPLQRDVQQRLQASGPLLQQSNVLDQQKQLYQSQRPLPETSSTSLDS 542

Query: 156 NAET---NAVDRREAVHQKIKSMKEMYMPLLLSIQKKFINSLQ--NSRAQTTNSEQ 4
            A+T   +  D +E V+QKIKSMKE Y+P L  + +K ++ LQ  +S  Q   S+Q
Sbjct: 543 TAQTGQSSGGDWQEEVYQKIKSMKESYLPELNEMYQKIVSKLQQHDSLPQQPKSDQ 598


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
           gi|223530005|gb|EEF31930.1| transcription cofactor,
           putative [Ricinus communis]
          Length = 1382

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 50/119 (42%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
 Frame = -2

Query: 330 QFQLQLGSQNKLNVLQRDMNQRMHASS-----LLQNQNTIEXXXXXXXXXXRPSEASSNS 166
           Q Q QL  Q + N LQRDM   + ASS     L Q QN I+             E SS S
Sbjct: 534 QLQQQLALQQQSNTLQRDMQAGLQASSQAPSSLTQQQNVIDQQKQLYQSQRPLPETSSTS 593

Query: 165 LAPNAET---NAVDRREAVHQKIKSMKEMYMPLLLSIQKKFINSLQ--NSRAQTTNSEQ 4
           L   A+T   NAVD +E V+QKIK+MKEMY P L  +  K    LQ  +S  Q   +EQ
Sbjct: 594 LDSTAQTGHANAVDVQEEVYQKIKAMKEMYFPELNEMYHKIATKLQQHDSLPQPPKTEQ 652


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