BLASTX nr result

ID: Cimicifuga21_contig00028916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028916
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170052.1| PREDICTED: DNA (cytosine-5)-methyltransferas...    55   5e-06
ref|XP_004149031.1| PREDICTED: DNA (cytosine-5)-methyltransferas...    55   5e-06
gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum]                  55   5e-06
ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa] ...    52   5e-06

>ref|XP_004170052.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like, partial
           [Cucumis sativus]
          Length = 753

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = -2

Query: 300 EQDRVLSVRETTRLQGFLDYYRLFGVVKDRYIQ 202
           EQDRV+++RE  RLQGF DYY+LFG VK+RYIQ
Sbjct: 668 EQDRVMTIRENARLQGFPDYYKLFGPVKERYIQ 700


>ref|XP_004149031.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Cucumis
           sativus]
          Length = 855

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = -2

Query: 300 EQDRVLSVRETTRLQGFLDYYRLFGVVKDRYIQ 202
           EQDRV+++RE  RLQGF DYY+LFG VK+RYIQ
Sbjct: 770 EQDRVMTIRENARLQGFPDYYKLFGPVKERYIQ 802


>gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum]
          Length = 824

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = -2

Query: 297 QDRVLSVRETTRLQGFLDYYRLFGVVKDRYIQ 202
           QDRVLS+RE  RLQGF DYY+LFG VK+RYIQ
Sbjct: 739 QDRVLSIRENARLQGFPDYYKLFGPVKERYIQ 770


>ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa]
           gi|222846392|gb|EEE83939.1| DNA methyltransferase
           [Populus trichocarpa]
          Length = 973

 Score = 52.4 bits (124), Expect(2) = 5e-06
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = -2

Query: 300 EQDRVLSVRETTRLQGFLDYYRLFGVVKDRYIQ 202
           EQDRVL++RE  RLQGF DYY+L G +K+RYIQ
Sbjct: 889 EQDRVLTIRENARLQGFPDYYQLCGPIKERYIQ 921



 Score = 22.7 bits (47), Expect(2) = 5e-06
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 161  DLPVFTLPAEFSIFGGDRNSSCDPQ 87
            D PVF+LP +F     D +SS + Q
Sbjct: 948  DDPVFSLPKKFPRITEDPSSSSEAQ 972


Top