BLASTX nr result

ID: Cimicifuga21_contig00028913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028913
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82321.1| hypothetical protein VITISV_021316 [Vitis vinifera]   228   1e-57
ref|XP_003518964.1| PREDICTED: nuclear transcription factor Y su...   217   2e-54
ref|XP_003536891.1| PREDICTED: nuclear transcription factor Y su...   208   8e-52
gb|AFK49656.1| nuclear transcription factor Y subunit B6 [Medica...   199   6e-49
ref|XP_002459056.1| hypothetical protein SORBIDRAFT_03g045150 [S...   196   3e-48

>emb|CAN82321.1| hypothetical protein VITISV_021316 [Vitis vinifera]
          Length = 175

 Score =  228 bits (581), Expect = 1e-57
 Identities = 117/164 (71%), Positives = 137/164 (83%)
 Frame = +1

Query: 58  NKYNFAGVATGSALRDDACVKEQDRLLPIANVGRIMKQMLPPNAKISKEAKETMQECVSE 237
           +KYN+AG ++ SA  +D  +KEQDRLLPIANVGRIMKQ+LPPNAKISKEAKETMQECVSE
Sbjct: 15  HKYNYAGGSSVSA--EDGIIKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSE 72

Query: 238 FISFVTGEASDKCHKEKRKTVNGDDVCWALGSLGFDEYTDPLKRYLHKYREYEGEKISQN 417
           FISFVTGEASDKCHKEKRKTVNGDD+CWALG+LGFD+Y +PLKRYLH+YRE EGEK +Q+
Sbjct: 73  FISFVTGEASDKCHKEKRKTVNGDDICWALGTLGFDDYAEPLKRYLHRYRELEGEKANQS 132

Query: 418 KASNNTDKGEPSFLSRDQLRNQPNSAPAPLKFNVMQGSNSSNSR 549
           KAS   D  EPS   R +   +   + APLKFNV++ SNSS S+
Sbjct: 133 KASEEND--EPSNY-RGEPPMKHTVSXAPLKFNVLERSNSSLSK 173


>ref|XP_003518964.1| PREDICTED: nuclear transcription factor Y subunit B-5-like [Glycine
           max]
          Length = 147

 Score =  217 bits (553), Expect = 2e-54
 Identities = 102/137 (74%), Positives = 121/137 (88%)
 Frame = +1

Query: 25  HNIDDSPDSQGNKYNFAGVATGSALRDDACVKEQDRLLPIANVGRIMKQMLPPNAKISKE 204
           +NI    + +G KYNF   A+ ++ +D+  +KEQDRLLPIANVGRIMKQ+LPPNAKISKE
Sbjct: 4   NNIGKVLEREGFKYNFTAAASDTSAQDEV-IKEQDRLLPIANVGRIMKQILPPNAKISKE 62

Query: 205 AKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDVCWALGSLGFDEYTDPLKRYLHKY 384
           AKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDD+CWAL +LGFD+Y++PLKRYLHKY
Sbjct: 63  AKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYSEPLKRYLHKY 122

Query: 385 REYEGEKISQNKASNNT 435
           RE+EGE+ +QNK +NNT
Sbjct: 123 REFEGERANQNKGNNNT 139


>ref|XP_003536891.1| PREDICTED: nuclear transcription factor Y subunit B-5-like [Glycine
           max]
          Length = 145

 Score =  208 bits (530), Expect = 8e-52
 Identities = 101/134 (75%), Positives = 116/134 (86%)
 Frame = +1

Query: 28  NIDDSPDSQGNKYNFAGVATGSALRDDACVKEQDRLLPIANVGRIMKQMLPPNAKISKEA 207
           NI    D +G KYNF   A+G++ +D   +KEQDRLLPIANVGRIMKQ+LPPNAKISKEA
Sbjct: 4   NIGKVLDREGFKYNFTASASGTSAQDGV-IKEQDRLLPIANVGRIMKQILPPNAKISKEA 62

Query: 208 KETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDVCWALGSLGFDEYTDPLKRYLHKYR 387
           KETMQE VSEFISFVTGEASDKCHKEKRKTVNGDD+CWAL +LGFD+Y++PLKRYL+KYR
Sbjct: 63  KETMQESVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYSEPLKRYLYKYR 122

Query: 388 EYEGEKISQNKASN 429
           E EGE+ +QNK SN
Sbjct: 123 EMEGERANQNKGSN 136


>gb|AFK49656.1| nuclear transcription factor Y subunit B6 [Medicago truncatula]
          Length = 194

 Score =  199 bits (505), Expect = 6e-49
 Identities = 105/179 (58%), Positives = 125/179 (69%), Gaps = 10/179 (5%)
 Frame = +1

Query: 46  DSQGNKYNFAGVATGSALRDDACVKEQDRLLPIANVGRIMKQMLPPNAKISKEAKETMQE 225
           D +  KYN     +    +D   +KEQDRLLPIANVGRIMKQ+LPPNAKISK+AKETMQE
Sbjct: 12  DREVFKYN-TNFTSHEQEQDHEVIKEQDRLLPIANVGRIMKQILPPNAKISKDAKETMQE 70

Query: 226 CVSEFISFVTGEASDKCHKEKRKTVNGDDVCWALGSLGFDEYTDPLKRYLHKYREYEGEK 405
           CVSEF+SFVTGEASDKCHKEKRKTVNGDDVCWALG+LGFD+Y +PLKRYL+KYRE + E+
Sbjct: 71  CVSEFVSFVTGEASDKCHKEKRKTVNGDDVCWALGTLGFDDYAEPLKRYLYKYRELDAER 130

Query: 406 ISQNKASNNTDKGEPSFLSRDQLRNQPN--------SAPAPLKFNVMQGS--NSSNSRP 552
            +QN   NN      +  + D++ N  N         +  P K NV   S  N+ NS P
Sbjct: 131 GNQNNKGNNNINININNNNSDEIENNINETYYYDDGKSQTPRKVNVASSSMFNNRNSGP 189


>ref|XP_002459056.1| hypothetical protein SORBIDRAFT_03g045150 [Sorghum bicolor]
           gi|241931031|gb|EES04176.1| hypothetical protein
           SORBIDRAFT_03g045150 [Sorghum bicolor]
          Length = 182

 Score =  196 bits (499), Expect = 3e-48
 Identities = 104/183 (56%), Positives = 123/183 (67%), Gaps = 6/183 (3%)
 Frame = +1

Query: 25  HNIDDSPDSQGNKYNFAGVATGSALRDDACVKEQDRLLPIANVGRIMKQMLPPNAKISKE 204
           H    +PD  G +    G   G     D  +KEQDRLLPIANVGRIMKQ+LPPNAKISKE
Sbjct: 4   HLHGQAPDGDGRRAGLVGGGAGGG--GDLEIKEQDRLLPIANVGRIMKQILPPNAKISKE 61

Query: 205 AKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDVCWALGSLGFDEYTDPLKRYLHKY 384
           AKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDVCWA G+LGFD+Y DP++RYLHKY
Sbjct: 62  AKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDVCWAFGALGFDDYVDPMRRYLHKY 121

Query: 385 REYEGEKISQNKASNNTDKG-----EPSFLSRDQLRNQPNSAPAPLKFN-VMQGSNSSNS 546
           RE EG++ +   +S     G      P   S       P++A     F   M   ++++S
Sbjct: 122 RELEGDRAAAAASSRGGGPGPGGDHHPG--STSSAGAGPSAAAGHFMFGAAMDRPDNTSS 179

Query: 547 RPY 555
           RP+
Sbjct: 180 RPF 182


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