BLASTX nr result

ID: Cimicifuga21_contig00028888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028888
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515045.1| arginine/serine-rich splicing factor, putati...    55   6e-06
ref|XP_002314579.1| predicted protein [Populus trichocarpa] gi|2...    54   1e-05

>ref|XP_002515045.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223546096|gb|EEF47599.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 622

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = -2

Query: 126 VPIDVTHETVKRELEVFGELRAIQMERLQQDGIVTALFYDLR 1
           VP +V+   ++RELEVFGE+R +QMER+  DGIVT  FYDLR
Sbjct: 116 VPTEVSESVIRRELEVFGEVRGVQMERI-SDGIVTVHFYDLR 156


>ref|XP_002314579.1| predicted protein [Populus trichocarpa] gi|222863619|gb|EEF00750.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = -2

Query: 126 VPIDVTHETVKRELEVFGELRAIQMERLQQDGIVTALFYDLR 1
           VP DV+   ++RELEVFGE+R +QMER+  DGIVT  FYDLR
Sbjct: 87  VPSDVSETLIRRELEVFGEVRGVQMERV-GDGIVTVHFYDLR 127


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