BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028886
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    56   4e-06

>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
 Frame = -3

Query: 283 PDVLFLSETKSSKAKMEMLRRRLKFDGASTVEAXXXXXXXXGLALFWKAGINVEILFANQ 104
           PD+LFL ETK+S+  +  +   L +D   TVE          LA+FWK+ + +E L+A++
Sbjct: 28  PDILFLMETKNSQDFVYKVFCWLGYDFIHTVEPEGRSGG---LAIFWKSHLEIEFLYADK 84

Query: 103 NLICGKFINLHATSS---WYFCCVYSEPIAYRRKLVW 2
           NL     ++L  +S    W+  CVY  P+ + R  +W
Sbjct: 85  NL-----MDLQVSSRNKVWFISCVYGLPVTHMRPKLW 116