BLASTX nr result

ID: Cimicifuga21_contig00028885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028885
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14821.3| unnamed protein product [Vitis vinifera]              142   8e-32
ref|XP_002269256.2| PREDICTED: uncharacterized protein LOC100245...   140   2e-31
ref|NP_195689.2| uncharacterized protein [Arabidopsis thaliana] ...   128   9e-28
ref|XP_002533135.1| conserved hypothetical protein [Ricinus comm...   125   1e-26
ref|XP_002868929.1| predicted protein [Arabidopsis lyrata subsp....   123   3e-26

>emb|CBI14821.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  142 bits (357), Expect = 8e-32
 Identities = 93/213 (43%), Positives = 112/213 (52%), Gaps = 43/213 (20%)
 Frame = -1

Query: 512 DSSENFK----DAEQ*SFDDGKIFTPEHMSSV-----SAVALHGDVSIEHSCKKREITRI 360
           D SE+F+    D    +FDD + +       V     SA  +     ++ S  KRE   +
Sbjct: 136 DDSEDFRFVGLDGINMNFDDLRAWKRVQGKEVANAKGSAETMSRKHILDQSGSKRERALV 195

Query: 359 EKDLCAASEDPYEFYTHRAKDFLPSIKDIEHRFF*AYESG*EVSRMLEENKIRLRCSEAK 180
           EKD+ A  EDP EF THRAKDFL SIKDIEHRFF A ESG EVSRMLE NKI +   +AK
Sbjct: 196 EKDVSAEREDPSEFITHRAKDFLSSIKDIEHRFFRASESGKEVSRMLETNKIGMGYCDAK 255

Query: 179 GRSPATAFLVAFHLACCQGDD-VIPNEPSFH----------------------------- 90
           GRS A+    AF L CCQ    ++ +EP  H                             
Sbjct: 256 GRSSASRLFGAFQLVCCQEKSALVSHEPLQHGTKIITWNRSTSSRSSSSKNPLTTAATKE 315

Query: 89  ----LGCDFIKEFCMITRSHSSTLDRLYAWERK 3
                G DF++EFCMI  SHSSTL+RLYAWERK
Sbjct: 316 DNDDSGSDFVEEFCMIAGSHSSTLERLYAWERK 348



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 34/76 (44%), Positives = 46/76 (60%)
 Frame = -1

Query: 677 CIVLPQERPRGRRAFSLRRALVPPVFVLCRDWSVGIKTIPSTELITAIKAHSCNFDSSEN 498
           CI+LPQER + RR FS RR L PP+FVLCRDW  G K +P+ EL     +++     S++
Sbjct: 505 CILLPQERTKSRRPFSPRRVLAPPIFVLCRDWLAGAKGLPADELKKPFDSNTNGESESKD 564

Query: 497 FKDAEQ*SFDDGKIFT 450
            +  E  S + G I T
Sbjct: 565 DEKTEDKSLNLGCIHT 580


>ref|XP_002269256.2| PREDICTED: uncharacterized protein LOC100245130, partial [Vitis
           vinifera]
          Length = 711

 Score =  140 bits (353), Expect = 2e-31
 Identities = 82/166 (49%), Positives = 95/166 (57%), Gaps = 34/166 (20%)
 Frame = -1

Query: 398 IEHSCKKREITRIEKDLCAASEDPYEFYTHRAKDFLPSIKDIEHRFF*AYESG*EVSRML 219
           ++ S  KRE   +EKD+ A  EDP EF THRAKDFL SIKDIEHRFF A ESG EVSRML
Sbjct: 269 LDQSGSKRERALVEKDVSAEREDPSEFITHRAKDFLSSIKDIEHRFFRASESGKEVSRML 328

Query: 218 EENKIRLRCSEAKGRSPATAFLVAFHLACCQGDD-VIPNEPSFH---------------- 90
           E NKI +   +AKGRS A+    AF L CCQ    ++ +EP  H                
Sbjct: 329 ETNKIGMGYCDAKGRSSASRLFGAFQLVCCQEKSALVSHEPLQHGTKIITWNRSTSSRSS 388

Query: 89  -----------------LGCDFIKEFCMITRSHSSTLDRLYAWERK 3
                             G DF++EFCMI  SHSSTL+RLYAWERK
Sbjct: 389 SSKNPLTTAATKEDNDDSGSDFVEEFCMIAGSHSSTLERLYAWERK 434



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 36/76 (47%), Positives = 46/76 (60%)
 Frame = -1

Query: 677 CIVLPQERPRGRRAFSLRRALVPPVFVLCRDWSVGIKTIPSTELITAIKAHSCNFDSSEN 498
           CI+LPQER + RR FS RR L PP+FVLCRDW  G K +P+ EL  AIK    +    ++
Sbjct: 591 CILLPQERTKSRRPFSPRRVLAPPIFVLCRDWLAGAKGLPADELSDAIKQFISDLHQFKD 650

Query: 497 FKDAEQ*SFDDGKIFT 450
            +  E  S + G I T
Sbjct: 651 DEKTEDKSLNLGCIHT 666


>ref|NP_195689.2| uncharacterized protein [Arabidopsis thaliana]
           gi|52354435|gb|AAU44538.1| hypothetical protein
           AT4G39790 [Arabidopsis thaliana]
           gi|61742739|gb|AAX55190.1| hypothetical protein
           At4g39790 [Arabidopsis thaliana]
           gi|332661719|gb|AEE87119.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 657

 Score =  128 bits (322), Expect = 9e-28
 Identities = 88/214 (41%), Positives = 110/214 (51%), Gaps = 42/214 (19%)
 Frame = -1

Query: 518 NFDSSENFKDAEQ*SFD---DGKIFTPEHMSSVSAVALHGDVSIEHSCKKREITRIEKDL 348
           +FDS      +EQ   D   D  +   E ++S   VA  G  +++ S  K   T+  K  
Sbjct: 176 DFDSFRFVGLSEQTEIDSECDAAVIGLEKITSQGNVAKSGSETLQDSSFK---TKQRKQS 232

Query: 347 CAAS---EDPYEFYTHRAKDFLPSIKDIEHRFF*AYESG*EVSRMLEENKIRLRCSEAKG 177
           C  +   EDP EF THRAKDF+ S+KDIEH+FF A ESG EVSRMLE NKIR+  ++  G
Sbjct: 233 CEDNDEREDPSEFITHRAKDFVSSMKDIEHKFFRASESGREVSRMLEVNKIRVGFADMTG 292

Query: 176 RSPATAFLVAFHLACCQGDDVIP--NEPSFH----------------------------- 90
           +  + AFL A   ACC+G    P   EP  H                             
Sbjct: 293 KGNSIAFLAALKRACCRGKSYSPVSQEPLSHQVTKVIVWKRTSSSRSSTSRNPLIQTSKE 352

Query: 89  -----LGCDFIKEFCMITRSHSSTLDRLYAWERK 3
                 G DFI+EFCMI+ SHSS+LDRLYAWERK
Sbjct: 353 DHDDESGSDFIEEFCMISGSHSSSLDRLYAWERK 386



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
 Frame = -1

Query: 677 CIVLPQERP-RGRRAFSLRRALVPPVFVLCRDWSVGIKTIPSTELITAIKAHSCNFD 510
           C++LPQER  R RR +S RR L PP+FVLCRDWS GIKT+PS EL  +IK  S + +
Sbjct: 544 CVLLPQERSTRNRRPWSPRRVLAPPIFVLCRDWSAGIKTLPSDELSGSIKGFSLDME 600


>ref|XP_002533135.1| conserved hypothetical protein [Ricinus communis]
           gi|223527063|gb|EEF29247.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 749

 Score =  125 bits (313), Expect = 1e-26
 Identities = 74/164 (45%), Positives = 92/164 (56%), Gaps = 30/164 (18%)
 Frame = -1

Query: 404 VSIEHSCKKREITRIEKDLCAASEDPYEFYTHRAKDFLPSIKDIEHRFF*AYESG*EVSR 225
           ++ + S  ++E     KD+ A  EDP EF THRAKDFL SIKDIE+RF  A ESG EVSR
Sbjct: 291 LAFDQSSLEKEKAAAMKDISAEREDPSEFITHRAKDFLSSIKDIEYRFLRASESGKEVSR 350

Query: 224 MLEENKIRLRCSEAKGRSPATAFLVAFHLACCQGDDVI---------------------- 111
           MLE N IR+  SE +G S A+AFL +  + CC+G   +                      
Sbjct: 351 MLEANNIRVGFSEIQGSSSASAFLASLQV-CCRGKTTLVTHDHVTKVITWKRTASSRSSS 409

Query: 110 --------PNEPSFHLGCDFIKEFCMITRSHSSTLDRLYAWERK 3
                     +     G DF++EFCMI+ SHSSTLDRLYAWERK
Sbjct: 410 SRNPLATATRDDVSDSGSDFLEEFCMISGSHSSTLDRLYAWERK 453



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
 Frame = -1

Query: 677 CIVLPQERPRGRRAFSLRRALVPPVFVLCRDWSVGIKTIPSTELITAIKAHSCNF----- 513
           CI+ PQER R R+ FS RRAL PP+F+L RDWS G+K++PS +L +AI+    +      
Sbjct: 610 CILQPQERCRNRKPFSPRRALAPPIFILSRDWSAGLKSLPSEKLSSAIQTFLSDLCHLMG 669

Query: 512 --------DSSENFKDAEQ*SFDDGKIFTPEHMSSVSA 423
                   +S E+ K+ E  S +D K     ++  + A
Sbjct: 670 QQAELQKKESKEDTKNGELESKEDEKSEVSSNLCCIHA 707


>ref|XP_002868929.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314765|gb|EFH45188.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 661

 Score =  123 bits (309), Expect = 3e-26
 Identities = 85/213 (39%), Positives = 106/213 (49%), Gaps = 41/213 (19%)
 Frame = -1

Query: 518 NFDSSENFKDAEQ*SFDDGKIFTPEHMSSVSAVALHGDVSIEHSC---KKREITRIEKDL 348
           +FDS      +EQ   D           S   VA  G  +++ S    K+R+ +  + D 
Sbjct: 175 DFDSFRFVGLSEQTEIDSDAAVIGLEKISQGNVAKSGSETLQDSSFKTKQRKQSSEDDDE 234

Query: 347 CAASE--DPYEFYTHRAKDFLPSIKDIEHRFF*AYESG*EVSRMLEENKIRLRCSEAKGR 174
               E  DP EF THRAKDF+ S+KDIEH+FF A ESG EVSRMLE NKIR+  ++  G+
Sbjct: 235 AGNGEREDPSEFITHRAKDFVSSMKDIEHKFFRASESGREVSRMLEANKIRVGFADMTGK 294

Query: 173 SPATAFLVAFHLACCQGDDVIP--NEPSFH------------------------------ 90
             + AFL A   ACC+G    P   EP  H                              
Sbjct: 295 GSSIAFLAALKQACCRGKSYSPVSQEPLSHQVTKVIVWKRTSSSRSSTSRNPLIQTTKED 354

Query: 89  ----LGCDFIKEFCMITRSHSSTLDRLYAWERK 3
                G DFI+EFCMI+ SHSS+LDRLYAWERK
Sbjct: 355 HDDESGSDFIEEFCMISGSHSSSLDRLYAWERK 387



 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
 Frame = -1

Query: 677 CIVLPQERP--RGRRAFSLRRALVPPVFVLCRDWSVGIKTIPSTELITAIKAHSCNFD 510
           C++LPQER   R RR +S RR L PP+FVLCRDWS G+KT+PS EL  +IK  S + +
Sbjct: 545 CVLLPQERSSLRNRRPWSPRRVLAPPIFVLCRDWSAGMKTLPSDELSGSIKGFSLDME 602


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