BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028868
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26017.3| unnamed protein product [Vitis vinifera]              317   2e-84
ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   317   2e-84
ref|XP_003609879.1| tRNA pseudouridine synthase family protein [...   312   6e-83
ref|XP_003609878.1| tRNA pseudouridine synthase family protein [...   308   6e-82
ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   306   2e-81

>emb|CBI26017.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  317 bits (812), Expect = 2e-84
 Identities = 151/190 (79%), Positives = 170/190 (89%)
 Frame = +1

Query: 199 YKWRMVIAYDGTHFSGWQYQQSSPTIQCLVENALTQATKLEREELALVGASRTDTGVHAW 378
           YKWR+VIAY+GT +SGWQYQQS PTIQC+VE ALT+ATKLERE+L LVGASRTDTGVHAW
Sbjct: 45  YKWRLVIAYEGTRYSGWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTGVHAW 104

Query: 379 GQVAHFITPFNYDRLDNIHAALNGLLPSGTRVREISPALPEFHARFSAKSKIYHYKIYND 558
           GQVAHF+TPFNYD L++IHAALNGLLP   RVREISPA+PEFHARFS KSKIYHYKIYND
Sbjct: 105 GQVAHFLTPFNYDGLESIHAALNGLLPPDIRVREISPAVPEFHARFSVKSKIYHYKIYND 164

Query: 559 SVMDPFQCRYAFHSPYKLNAVAMREAAQLFVGKHDFSSFVNASNDNRPRDPVKNIFRFDV 738
           +VMDPF   Y +HS YKLN +AMREAA+ F GKHDFS+FVNAS+++R  +PVKNIFRFDV
Sbjct: 165 AVMDPFLRHYVYHSVYKLNTLAMREAAKHFTGKHDFSAFVNASHNDRSPNPVKNIFRFDV 224

Query: 739 IEMGALLQLE 768
            EMGALLQLE
Sbjct: 225 NEMGALLQLE 234


>ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Vitis vinifera]
          Length = 336

 Score =  317 bits (812), Expect = 2e-84
 Identities = 151/190 (79%), Positives = 170/190 (89%)
 Frame = +1

Query: 199 YKWRMVIAYDGTHFSGWQYQQSSPTIQCLVENALTQATKLEREELALVGASRTDTGVHAW 378
           YKWR+VIAY+GT +SGWQYQQS PTIQC+VE ALT+ATKLERE+L LVGASRTDTGVHAW
Sbjct: 55  YKWRLVIAYEGTRYSGWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTGVHAW 114

Query: 379 GQVAHFITPFNYDRLDNIHAALNGLLPSGTRVREISPALPEFHARFSAKSKIYHYKIYND 558
           GQVAHF+TPFNYD L++IHAALNGLLP   RVREISPA+PEFHARFS KSKIYHYKIYND
Sbjct: 115 GQVAHFLTPFNYDGLESIHAALNGLLPPDIRVREISPAVPEFHARFSVKSKIYHYKIYND 174

Query: 559 SVMDPFQCRYAFHSPYKLNAVAMREAAQLFVGKHDFSSFVNASNDNRPRDPVKNIFRFDV 738
           +VMDPF   Y +HS YKLN +AMREAA+ F GKHDFS+FVNAS+++R  +PVKNIFRFDV
Sbjct: 175 AVMDPFLRHYVYHSVYKLNTLAMREAAKHFTGKHDFSAFVNASHNDRSPNPVKNIFRFDV 234

Query: 739 IEMGALLQLE 768
            EMGALLQLE
Sbjct: 235 NEMGALLQLE 244


>ref|XP_003609879.1| tRNA pseudouridine synthase family protein [Medicago truncatula]
           gi|355510934|gb|AES92076.1| tRNA pseudouridine synthase
           family protein [Medicago truncatula]
          Length = 322

 Score =  312 bits (799), Expect = 6e-83
 Identities = 147/217 (67%), Positives = 180/217 (82%), Gaps = 1/217 (0%)
 Frame = +1

Query: 121 PLPSNCSSSSKNTDGG-TVDTKPTLPSYKWRMVIAYDGTHFSGWQYQQSSPTIQCLVENA 297
           P+PS  S  S N+     V+ KP    YKWR++++YDGT ++GWQYQ+S PT+QC VE A
Sbjct: 15  PIPSPTSLLSLNSAASDVVEVKPNQDGYKWRLLLSYDGTRYAGWQYQESPPTVQCAVEKA 74

Query: 298 LTQATKLEREELALVGASRTDTGVHAWGQVAHFITPFNYDRLDNIHAALNGLLPSGTRVR 477
           L +ATKL+R++L LVGASRTD GVHAWGQVAHF+TPFNYD LD++HAALNGLLPS  RVR
Sbjct: 75  LIRATKLQRKDLQLVGASRTDAGVHAWGQVAHFLTPFNYDNLDSVHAALNGLLPSDIRVR 134

Query: 478 EISPALPEFHARFSAKSKIYHYKIYNDSVMDPFQCRYAFHSPYKLNAVAMREAAQLFVGK 657
           EISPA  EFHARFS KSKIYHYKIY+D++MDPFQ  +A+H+ YKLN+ AMREAA+ F+GK
Sbjct: 135 EISPASAEFHARFSVKSKIYHYKIYSDTIMDPFQRHFAYHNMYKLNSAAMREAARYFIGK 194

Query: 658 HDFSSFVNASNDNRPRDPVKNIFRFDVIEMGALLQLE 768
           HDF++F NAS+++R  DPVK+IFRFDV EMGALLQLE
Sbjct: 195 HDFTAFENASHNDRIPDPVKHIFRFDVKEMGALLQLE 231


>ref|XP_003609878.1| tRNA pseudouridine synthase family protein [Medicago truncatula]
           gi|355510933|gb|AES92075.1| tRNA pseudouridine synthase
           family protein [Medicago truncatula]
          Length = 350

 Score =  308 bits (790), Expect = 6e-82
 Identities = 143/213 (67%), Positives = 177/213 (83%)
 Frame = +1

Query: 130 SNCSSSSKNTDGGTVDTKPTLPSYKWRMVIAYDGTHFSGWQYQQSSPTIQCLVENALTQA 309
           S+  S+  +     V+ KP    YKWR++++YDGT ++GWQYQ+S PT+QC VE AL +A
Sbjct: 47  SHSISNFPSISSDVVEVKPNQDGYKWRLLLSYDGTRYAGWQYQESPPTVQCAVEKALIRA 106

Query: 310 TKLEREELALVGASRTDTGVHAWGQVAHFITPFNYDRLDNIHAALNGLLPSGTRVREISP 489
           TKL+R++L LVGASRTD GVHAWGQVAHF+TPFNYD LD++HAALNGLLPS  RVREISP
Sbjct: 107 TKLQRKDLQLVGASRTDAGVHAWGQVAHFLTPFNYDNLDSVHAALNGLLPSDIRVREISP 166

Query: 490 ALPEFHARFSAKSKIYHYKIYNDSVMDPFQCRYAFHSPYKLNAVAMREAAQLFVGKHDFS 669
           A  EFHARFS KSKIYHYKIY+D++MDPFQ  +A+H+ YKLN+ AMREAA+ F+GKHDF+
Sbjct: 167 ASAEFHARFSVKSKIYHYKIYSDTIMDPFQRHFAYHNMYKLNSAAMREAARYFIGKHDFT 226

Query: 670 SFVNASNDNRPRDPVKNIFRFDVIEMGALLQLE 768
           +F NAS+++R  DPVK+IFRFDV EMGALLQLE
Sbjct: 227 AFENASHNDRIPDPVKHIFRFDVKEMGALLQLE 259


>ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max]
          Length = 327

 Score =  306 bits (785), Expect = 2e-81
 Identities = 141/190 (74%), Positives = 166/190 (87%)
 Frame = +1

Query: 199 YKWRMVIAYDGTHFSGWQYQQSSPTIQCLVENALTQATKLEREELALVGASRTDTGVHAW 378
           YKWR+V+AYDGT ++GWQYQ+S PT+QC VE ALTQATKL+R++L LVGASRTD GVHAW
Sbjct: 44  YKWRIVLAYDGTQYAGWQYQESPPTVQCTVEKALTQATKLQRKDLCLVGASRTDAGVHAW 103

Query: 379 GQVAHFITPFNYDRLDNIHAALNGLLPSGTRVREISPALPEFHARFSAKSKIYHYKIYND 558
           GQVAHF TPFNYD L+ +HAALNGLLP+  R+REISPA  EFHARFSAKSKIYHYKIYND
Sbjct: 104 GQVAHFFTPFNYDNLEQLHAALNGLLPTDIRIREISPASAEFHARFSAKSKIYHYKIYND 163

Query: 559 SVMDPFQCRYAFHSPYKLNAVAMREAAQLFVGKHDFSSFVNASNDNRPRDPVKNIFRFDV 738
           ++MDPFQ  +A+HS YKLN+  MREAA  FVGKHDFS+F NAS+++R  DPVK++FRFD+
Sbjct: 164 AIMDPFQRHFAYHSVYKLNSAVMREAATYFVGKHDFSAFANASHNDRVPDPVKHVFRFDL 223

Query: 739 IEMGALLQLE 768
            EMGALLQLE
Sbjct: 224 KEMGALLQLE 233