BLASTX nr result

ID: Cimicifuga21_contig00028844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028844
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510512.1| Myosin heavy chain, striated muscle, putativ...   122   5e-26
ref|XP_002301986.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_004168855.1| PREDICTED: LOW QUALITY PROTEIN: filament-lik...   113   3e-23
ref|XP_004136392.1| PREDICTED: filament-like plant protein 4-lik...   113   3e-23
ref|XP_002280306.2| PREDICTED: filament-like plant protein 4-lik...   113   3e-23

>ref|XP_002510512.1| Myosin heavy chain, striated muscle, putative [Ricinus communis]
           gi|223551213|gb|EEF52699.1| Myosin heavy chain, striated
           muscle, putative [Ricinus communis]
          Length = 1041

 Score =  122 bits (306), Expect = 5e-26
 Identities = 63/118 (53%), Positives = 75/118 (63%)
 Frame = +3

Query: 273 MDRRGWPWXXXXXXXXXXXXVLTXXXXXXXXXXXXXXXXXEKPKKASSVKISVESYEHLT 452
           MDRR WPW            V T                 +  KK + V+ISVESY HLT
Sbjct: 1   MDRRSWPWKKKSSDKTEKAAVATDSGGGGSLASSGSQADKDNYKKPNYVQISVESYTHLT 60

Query: 453 GLEDEVKTLNDQITTLNDEVDTLNEKLSSAHSEMVTKESIVKQHAKVAEEAVSGWEKA 626
           GLED+VKT   Q+ TL D+++ LNEKLS+A+SEM TKE++VKQHAKVAEEAVSGWEKA
Sbjct: 61  GLEDQVKTYEQQVQTLEDQINELNEKLSAANSEMTTKENLVKQHAKVAEEAVSGWEKA 118


>ref|XP_002301986.1| predicted protein [Populus trichocarpa] gi|222843712|gb|EEE81259.1|
           predicted protein [Populus trichocarpa]
          Length = 1082

 Score =  115 bits (289), Expect = 5e-24
 Identities = 62/118 (52%), Positives = 73/118 (61%)
 Frame = +3

Query: 273 MDRRGWPWXXXXXXXXXXXXVLTXXXXXXXXXXXXXXXXXEKPKKASSVKISVESYEHLT 452
           MDRR WPW                                +  KK + V+ISVESY HLT
Sbjct: 1   MDRRSWPWKKKSSDKTEKAA--------PAEDSGGSQGEKDSYKKPNYVQISVESYTHLT 52

Query: 453 GLEDEVKTLNDQITTLNDEVDTLNEKLSSAHSEMVTKESIVKQHAKVAEEAVSGWEKA 626
           GLED+VKT  +Q+ TL D++  LNEKLS+AHSEM TKE++VKQHAKVAEEAVSGWEKA
Sbjct: 53  GLEDQVKTYGEQVETLEDQIMDLNEKLSAAHSEMTTKENLVKQHAKVAEEAVSGWEKA 110


>ref|XP_004168855.1| PREDICTED: LOW QUALITY PROTEIN: filament-like plant protein 4-like
           [Cucumis sativus]
          Length = 1084

 Score =  113 bits (282), Expect = 3e-23
 Identities = 62/118 (52%), Positives = 73/118 (61%)
 Frame = +3

Query: 273 MDRRGWPWXXXXXXXXXXXXVLTXXXXXXXXXXXXXXXXXEKPKKASSVKISVESYEHLT 452
           MDRRGWPW              +                    KK S V+ISVE+Y HLT
Sbjct: 7   MDRRGWPWKKKSSEKAAEKANASESAGTQGDQDGY--------KKPSYVQISVETYSHLT 58

Query: 453 GLEDEVKTLNDQITTLNDEVDTLNEKLSSAHSEMVTKESIVKQHAKVAEEAVSGWEKA 626
           GLED+VKT ++QI TL  E+  LNEKLS+A SEM TK+++VKQHAKVAEEAVSGWEKA
Sbjct: 59  GLEDQVKTRDEQIQTLEGEIKDLNEKLSAAQSEMTTKDNLVKQHAKVAEEAVSGWEKA 116


>ref|XP_004136392.1| PREDICTED: filament-like plant protein 4-like [Cucumis sativus]
          Length = 1078

 Score =  113 bits (282), Expect = 3e-23
 Identities = 62/118 (52%), Positives = 73/118 (61%)
 Frame = +3

Query: 273 MDRRGWPWXXXXXXXXXXXXVLTXXXXXXXXXXXXXXXXXEKPKKASSVKISVESYEHLT 452
           MDRRGWPW              +                    KK S V+ISVE+Y HLT
Sbjct: 1   MDRRGWPWKKKSSEKAAEKANASESAGTQGDQDGY--------KKPSYVQISVETYSHLT 52

Query: 453 GLEDEVKTLNDQITTLNDEVDTLNEKLSSAHSEMVTKESIVKQHAKVAEEAVSGWEKA 626
           GLED+VKT ++QI TL  E+  LNEKLS+A SEM TK+++VKQHAKVAEEAVSGWEKA
Sbjct: 53  GLEDQVKTRDEQIQTLEGEIKDLNEKLSAAQSEMTTKDNLVKQHAKVAEEAVSGWEKA 110


>ref|XP_002280306.2| PREDICTED: filament-like plant protein 4-like [Vitis vinifera]
          Length = 1040

 Score =  113 bits (282), Expect = 3e-23
 Identities = 55/78 (70%), Positives = 64/78 (82%)
 Frame = +3

Query: 393 EKPKKASSVKISVESYEHLTGLEDEVKTLNDQITTLNDEVDTLNEKLSSAHSEMVTKESI 572
           E  KK + V+ISVESY HLTGLED+VKT  DQ+  L D++  LNEKLS AHSEM TK+++
Sbjct: 39  ENYKKPTYVQISVESYSHLTGLEDQVKTYEDQVQKLEDQITELNEKLSEAHSEMTTKDNL 98

Query: 573 VKQHAKVAEEAVSGWEKA 626
           VKQHAKVAEEAVSGWEKA
Sbjct: 99  VKQHAKVAEEAVSGWEKA 116


Top