BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028835
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30094.3| unnamed protein product [Vitis vinifera]              308   3e-82
ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containi...   308   3e-82
ref|XP_002322628.1| predicted protein [Populus trichocarpa] gi|2...   287   1e-75
ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   278   4e-73
ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containi...   278   4e-73

>emb|CBI30094.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  308 bits (790), Expect = 3e-82
 Identities = 147/195 (75%), Positives = 173/195 (88%), Gaps = 2/195 (1%)
 Frame = +3

Query: 3   REMFNS--STQRDLVTWNSMIAAYAHHGCGREAILLMEEMRESGFKPDDVTYIGVLSACG 176
           R+MF+   ++QRDLV+WN +IAAYAHHG G+EAI   +EMR+SGFKPDDVTY+G+LSAC 
Sbjct: 371 RKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACS 430

Query: 177 HAGLVDEGLKYFDELVRVGSVELREDHYACLVDLCGRAGRIEDAFDITKRLGNKASACVW 356
           HAGLV+EGLKYFDELV+  S+ +REDHYACLVDLCGRAGR+++AF   +RL  K SA VW
Sbjct: 431 HAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVW 490

Query: 357 GALLAGCSVHGNVKLGKLAAKRLLEVEPENAGTYMLLSNIYASTGKWREASKLRLKMKDK 536
           GALLAGC+VH NVK+GK AAK+LLEVEPENAGTY+LLSNIYASTGKWREA+++RLKMKDK
Sbjct: 491 GALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDK 550

Query: 537 GLKKQPGCSWIEVEN 581
           GLKKQPGCSWIEV N
Sbjct: 551 GLKKQPGCSWIEVGN 565


>ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Vitis vinifera]
          Length = 635

 Score =  308 bits (790), Expect = 3e-82
 Identities = 147/195 (75%), Positives = 173/195 (88%), Gaps = 2/195 (1%)
 Frame = +3

Query: 3   REMFNS--STQRDLVTWNSMIAAYAHHGCGREAILLMEEMRESGFKPDDVTYIGVLSACG 176
           R+MF+   ++QRDLV+WN +IAAYAHHG G+EAI   +EMR+SGFKPDDVTY+G+LSAC 
Sbjct: 392 RKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACS 451

Query: 177 HAGLVDEGLKYFDELVRVGSVELREDHYACLVDLCGRAGRIEDAFDITKRLGNKASACVW 356
           HAGLV+EGLKYFDELV+  S+ +REDHYACLVDLCGRAGR+++AF   +RL  K SA VW
Sbjct: 452 HAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVW 511

Query: 357 GALLAGCSVHGNVKLGKLAAKRLLEVEPENAGTYMLLSNIYASTGKWREASKLRLKMKDK 536
           GALLAGC+VH NVK+GK AAK+LLEVEPENAGTY+LLSNIYASTGKWREA+++RLKMKDK
Sbjct: 512 GALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDK 571

Query: 537 GLKKQPGCSWIEVEN 581
           GLKKQPGCSWIEV N
Sbjct: 572 GLKKQPGCSWIEVGN 586


>ref|XP_002322628.1| predicted protein [Populus trichocarpa] gi|222867258|gb|EEF04389.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score =  287 bits (734), Expect = 1e-75
 Identities = 132/186 (70%), Positives = 161/186 (86%)
 Frame = +3

Query: 24  TQRDLVTWNSMIAAYAHHGCGREAILLMEEMRESGFKPDDVTYIGVLSACGHAGLVDEGL 203
           +QRDLV WN MIAAYAHHGCG EAI L E+M+  GFKP+DV+Y+ +LSAC HAGLVDEGL
Sbjct: 324 SQRDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGL 383

Query: 204 KYFDELVRVGSVELREDHYACLVDLCGRAGRIEDAFDITKRLGNKASACVWGALLAGCSV 383
            YFDEL R  S++LREDH+ACLVDLCGRAGR+++A+D  K+LG KAS+ +WG LLAGC+ 
Sbjct: 384 NYFDELGRDNSIQLREDHHACLVDLCGRAGRLKEAYDFIKQLGTKASSSIWGGLLAGCNA 443

Query: 384 HGNVKLGKLAAKRLLEVEPENAGTYMLLSNIYASTGKWREASKLRLKMKDKGLKKQPGCS 563
           HG++++G+LAAK L + +PENAGTY+LLSNIYAS  KWREAS++RLKMK+KGLKKQPGCS
Sbjct: 444 HGDLEIGQLAAKELEKEDPENAGTYLLLSNIYASGRKWREASRVRLKMKEKGLKKQPGCS 503

Query: 564 WIEVEN 581
           WIEV N
Sbjct: 504 WIEVGN 509



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 1/185 (0%)
 Frame = +3

Query: 6   EMFNSSTQRDLVTWNSMIAAYAHHGCGREAILLMEEMRESGFKPDDVTYIGVLSACGHAG 185
           E+F    +R++V+WN++IAA    G   EA    +EM     K D +++  ++     +G
Sbjct: 90  EVFERMHERNMVSWNAVIAALVQCGRVEEARRRFDEMP----KRDVISWTTMVMGLARSG 145

Query: 186 LVDEGLKYFDELVRVGSVELREDHYACLVDLCGRAGRIEDAFDITKRLGNKASACVWGAL 365
            VDE  K FD +     V      +  +V    +  R+++AFD+ +R+  + +   W  +
Sbjct: 146 RVDEARKVFDRMPERNVVS-----WNAMVTGYAKNMRLDEAFDLFERMPER-NLSSWNTM 199

Query: 366 LAGCSVHGNVKLGKLAAKRLLEVEPENAGTYMLLSNIYASTGKWREASKLRLKM-KDKGL 542
           + G   +G +     A K   E+  +N  ++  +   Y   G+   A K+ ++M KD G 
Sbjct: 200 ITGFIQNGEL---AWARKVFNEMPEKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGA 256

Query: 543 KKQPG 557
           +   G
Sbjct: 257 RPNEG 261


>ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  278 bits (712), Expect = 4e-73
 Identities = 133/195 (68%), Positives = 162/195 (83%), Gaps = 2/195 (1%)
 Frame = +3

Query: 3   REMFNSST--QRDLVTWNSMIAAYAHHGCGREAILLMEEMRESGFKPDDVTYIGVLSACG 176
           R++F+  +   RD+V+WN MIAAYAHHG G +AI L +EM+  GF+PD+VTYI +LSAC 
Sbjct: 406 RKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACS 465

Query: 177 HAGLVDEGLKYFDELVRVGSVELREDHYACLVDLCGRAGRIEDAFDITKRLGNKASACVW 356
           HAGLVDEGLK F+ LVR  S++LREDH+ CLVDL GRAGR+++AFD  K L  K SA VW
Sbjct: 466 HAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVW 525

Query: 357 GALLAGCSVHGNVKLGKLAAKRLLEVEPENAGTYMLLSNIYASTGKWREASKLRLKMKDK 536
            ALLAGC+VHG++ LGKL A++LLE EPENAGTY++LSNIYASTGKWREA+ +R+KMKDK
Sbjct: 526 AALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDK 585

Query: 537 GLKKQPGCSWIEVEN 581
           GLKKQPGCSWIEV N
Sbjct: 586 GLKKQPGCSWIEVGN 600


>ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  278 bits (712), Expect = 4e-73
 Identities = 133/195 (68%), Positives = 162/195 (83%), Gaps = 2/195 (1%)
 Frame = +3

Query: 3   REMFNSST--QRDLVTWNSMIAAYAHHGCGREAILLMEEMRESGFKPDDVTYIGVLSACG 176
           R++F+  +   RD+V+WN MIAAYAHHG G +AI L +EM+  GF+PD+VTYI +LSAC 
Sbjct: 406 RKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACS 465

Query: 177 HAGLVDEGLKYFDELVRVGSVELREDHYACLVDLCGRAGRIEDAFDITKRLGNKASACVW 356
           HAGLVDEGLK F+ LVR  S++LREDH+ CLVDL GRAGR+++AFD  K L  K SA VW
Sbjct: 466 HAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVW 525

Query: 357 GALLAGCSVHGNVKLGKLAAKRLLEVEPENAGTYMLLSNIYASTGKWREASKLRLKMKDK 536
            ALLAGC+VHG++ LGKL A++LLE EPENAGTY++LSNIYASTGKWREA+ +R+KMKDK
Sbjct: 526 AALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDK 585

Query: 537 GLKKQPGCSWIEVEN 581
           GLKKQPGCSWIEV N
Sbjct: 586 GLKKQPGCSWIEVGN 600