BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028827
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containi...   105   3e-21
ref|XP_002517040.1| pentatricopeptide repeat-containing protein,...   104   7e-21
ref|XP_002318245.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_002322445.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
emb|CBI31865.3| unnamed protein product [Vitis vinifera]              103   2e-20

>ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 584

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/89 (56%), Positives = 64/89 (71%)
 Frame = -1

Query: 268 GEWVHMYIDKNKLRWETNVVLGTALVDMYAKCGCIDIALGLFSEIHDKDVILWNAMISGL 89
           G W+H Y+ ++KLR   +V L TALVDMYAKCGCID A G+F+ +  K++  WNAM+SGL
Sbjct: 308 GRWIHAYMKRSKLR--NDVFLDTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGL 365

Query: 88  ALHGHGHDALKLFFEMTRNGTMPNPTTFV 2
           A+HGHG  AL+LF +M   G  PN  TFV
Sbjct: 366 AIHGHGFAALELFKQMESTGVGPNDITFV 394


>ref|XP_002517040.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543675|gb|EEF45203.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 456

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/89 (56%), Positives = 61/89 (68%)
 Frame = -1

Query: 268 GEWVHMYIDKNKLRWETNVVLGTALVDMYAKCGCIDIALGLFSEIHDKDVILWNAMISGL 89
           G WVH YID+N L  E N +LGTAL+DMYAKCGCI  A  +F+++H K+V  W AMI+GL
Sbjct: 317 GRWVHDYIDRNSL--EMNSILGTALIDMYAKCGCISEAYVVFNKLHIKNVYTWTAMINGL 374

Query: 88  ALHGHGHDALKLFFEMTRNGTMPNPTTFV 2
           A+HG    +L LF  M  NG  PN  TFV
Sbjct: 375 AMHGDALSSLNLFSHMISNGVQPNGVTFV 403



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = -1

Query: 268 GEWVH-MYIDKNKLRWETNVVLGTALVDMYAKCGCIDIALGLFSEIHDKDVILWNAMISG 92
           G WVH  Y++  +++W+  V +G++L+DMY KCG  D A  LF+E+  K+++ W+A+I+G
Sbjct: 215 GRWVHGFYVESGRVKWD--VYIGSSLLDMYCKCGYCDDACKLFNEMPVKNIVCWSALIAG 272

Query: 91  LALHGHGHDALKLFFEMTRNGTMPNPTT 8
                   DAL LF +M      PN  T
Sbjct: 273 YVQCNRFKDALLLFQDMLLTDVRPNQCT 300


>ref|XP_002318245.1| predicted protein [Populus trichocarpa] gi|222858918|gb|EEE96465.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score =  104 bits (260), Expect = 7e-21
 Identities = 43/89 (48%), Positives = 67/89 (75%)
 Frame = -1

Query: 268 GEWVHMYIDKNKLRWETNVVLGTALVDMYAKCGCIDIALGLFSEIHDKDVILWNAMISGL 89
           G WVH +ID+  ++W+  + +GTA+VDMYAKCGCI++++ +F+ +  K+V+ WNA+++GL
Sbjct: 252 GRWVHEHIDRKAIKWD--IQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGL 309

Query: 88  ALHGHGHDALKLFFEMTRNGTMPNPTTFV 2
           A+HGH +  L+LF EM R G  PN  TF+
Sbjct: 310 AMHGHAYKVLELFEEMVRVGMRPNEVTFL 338



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/64 (40%), Positives = 41/64 (64%)
 Frame = -1

Query: 208 LGTALVDMYAKCGCIDIALGLFSEIHDKDVILWNAMISGLALHGHGHDALKLFFEMTRNG 29
           +  AL+DMY KCGC+  A  +F E+ +KD++ W ++ISGL       +AL+LF +M  +G
Sbjct: 169 VSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSG 228

Query: 28  TMPN 17
             P+
Sbjct: 229 IEPD 232


>ref|XP_002322445.1| predicted protein [Populus trichocarpa] gi|222869441|gb|EEF06572.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/89 (51%), Positives = 65/89 (73%)
 Frame = -1

Query: 268 GEWVHMYIDKNKLRWETNVVLGTALVDMYAKCGCIDIALGLFSEIHDKDVILWNAMISGL 89
           G  V  YID   ++W+  + +GTA+VDMYAKCGCI++A+ +F+ +  K+V+ WNAM++GL
Sbjct: 261 GRLVREYIDHKAIKWD--IQIGTAVVDMYAKCGCIEMAMQIFNVMPHKNVLTWNAMLNGL 318

Query: 88  ALHGHGHDALKLFFEMTRNGTMPNPTTFV 2
           A+HGHG  AL+LF EM R G  PN  TF+
Sbjct: 319 AMHGHGQKALQLFEEMVREGMRPNEVTFL 347


>emb|CBI31865.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score =  103 bits (256), Expect = 2e-20
 Identities = 45/89 (50%), Positives = 64/89 (71%)
 Frame = -1

Query: 268 GEWVHMYIDKNKLRWETNVVLGTALVDMYAKCGCIDIALGLFSEIHDKDVILWNAMISGL 89
           G WV  YI++  + W+ ++  GTALVDMYAKCGCI++AL +F+ I ++++  WNA++ GL
Sbjct: 323 GRWVQEYIERQGIEWDIHI--GTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGL 380

Query: 88  ALHGHGHDALKLFFEMTRNGTMPNPTTFV 2
           A+HGHGH+ALK F  M   G  PN  TF+
Sbjct: 381 AMHGHGHEALKHFELMIGAGIRPNEVTFL 409



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/84 (39%), Positives = 51/84 (60%)
 Frame = -1

Query: 268 GEWVHMYIDKNKLRWETNVVLGTALVDMYAKCGCIDIALGLFSEIHDKDVILWNAMISGL 89
           G+ VH  + K    +   +V+G ALVDMY KC C+  A  LF E+ D+D++ W ++ISGL
Sbjct: 222 GKGVHGLVYKRA--FGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGL 279

Query: 88  ALHGHGHDALKLFFEMTRNGTMPN 17
                  D+L+LF++M  +G  P+
Sbjct: 280 VQCKQPKDSLELFYDMQISGVEPD 303