BLASTX nr result

ID: Cimicifuga21_contig00028819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028819
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243...   104   7e-21
emb|CBI20080.3| unnamed protein product [Vitis vinifera]              104   7e-21
emb|CAN67540.1| hypothetical protein VITISV_012382 [Vitis vinifera]   102   3e-20
ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ric...    93   3e-17
ref|XP_003630434.1| Tyrosyl-DNA phosphodiesterase [Medicago trun...    86   2e-15

>ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243589 [Vitis vinifera]
          Length = 1091

 Score =  104 bits (260), Expect = 7e-21
 Identities = 54/106 (50%), Positives = 67/106 (63%)
 Frame = +2

Query: 8   TIGRKHHYCNLVFDDPRVSKFHCQIFFDAFDRKVFILDGFFFPFSSDLNEIRIKFREGER 187
           TIGR H  C+ V +D RVSK HCQI FD F RK+FILDG  F    DL+++       E 
Sbjct: 68  TIGRSHQSCDYVLEDRRVSKQHCQILFDGFHRKIFILDGGRFRTKGDLDKL-------EE 120

Query: 188 FKVRPSLNGVFVNGIRVGVGKVMELFTGDEVQFVCANELDSSFDIK 325
             VRPSLNG+F+NG ++G   + EL  GDEV FVC NE  + F I+
Sbjct: 121 TAVRPSLNGIFLNGFKIGKDTLKELSAGDEVSFVCQNERLAGFLIQ 166


>emb|CBI20080.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score =  104 bits (260), Expect = 7e-21
 Identities = 54/106 (50%), Positives = 67/106 (63%)
 Frame = +2

Query: 8   TIGRKHHYCNLVFDDPRVSKFHCQIFFDAFDRKVFILDGFFFPFSSDLNEIRIKFREGER 187
           TIGR H  C+ V +D RVSK HCQI FD F RK+FILDG  F    DL+++       E 
Sbjct: 59  TIGRSHQSCDYVLEDRRVSKQHCQILFDGFHRKIFILDGGRFRTKGDLDKL-------EE 111

Query: 188 FKVRPSLNGVFVNGIRVGVGKVMELFTGDEVQFVCANELDSSFDIK 325
             VRPSLNG+F+NG ++G   + EL  GDEV FVC NE  + F I+
Sbjct: 112 TAVRPSLNGIFLNGFKIGKDTLKELSAGDEVSFVCQNERLAGFLIQ 157


>emb|CAN67540.1| hypothetical protein VITISV_012382 [Vitis vinifera]
          Length = 1423

 Score =  102 bits (254), Expect = 3e-20
 Identities = 53/106 (50%), Positives = 65/106 (61%)
 Frame = +2

Query: 8   TIGRKHHYCNLVFDDPRVSKFHCQIFFDAFDRKVFILDGFFFPFSSDLNEIRIKFREGER 187
           TIGR H  C+ V +D RVSK HCQI FD F RK+FILDG  F    D   +     + E 
Sbjct: 68  TIGRSHQSCDYVLEDRRVSKQHCQILFDGFHRKIFILDGGRFRTKGD---VHFNLDKLEE 124

Query: 188 FKVRPSLNGVFVNGIRVGVGKVMELFTGDEVQFVCANELDSSFDIK 325
             VRPSLNG+F+NG ++G   + EL  GDEV FVC NE  + F I+
Sbjct: 125 TAVRPSLNGIFLNGFKIGKDTLKELSAGDEVSFVCQNERLAGFLIQ 170


>ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ricinus communis]
           gi|223550173|gb|EEF51660.1| tyrosyl-DNA
           phosphodiesterase, putative [Ricinus communis]
          Length = 1148

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 57/116 (49%), Positives = 67/116 (57%), Gaps = 17/116 (14%)
 Frame = +2

Query: 5   YTIGRKHHY--CNLVFDDPRVSKFHCQIFFDAFDRKVFILDGFFFPFSSDLNEIRIKFR- 175
           YTIGR      C+ VF D RVSK HCQI FD+ +RKV+ILDG     S     +  +FR 
Sbjct: 77  YTIGRSSTDPDCDFVFSDRRVSKQHCQILFDSVNRKVYILDGILLLHSISSIRVVSEFRK 136

Query: 176 --------EGER------FKVRPSLNGVFVNGIRVGVGKVMELFTGDEVQFVCANE 301
                   EGE        ++R S+NGVF+NGIRV  G V EL TGDEV FVC NE
Sbjct: 137 RLRNYDQLEGEEKEGFECLRIRFSMNGVFINGIRVKRGIVRELCTGDEVLFVCGNE 192


>ref|XP_003630434.1| Tyrosyl-DNA phosphodiesterase [Medicago truncatula]
           gi|355524456|gb|AET04910.1| Tyrosyl-DNA
           phosphodiesterase [Medicago truncatula]
          Length = 1064

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
 Frame = +2

Query: 5   YTIGRKHHYCNLVFDDPRVSKFHCQIFFDAFDRKVFILDGFFFPFSSDL---NEIRIKFR 175
           Y+IGRK H C+ VF+D RVSK HCQIFFD   RK++IL G      S +   + I  +FR
Sbjct: 57  YSIGRKRHDCHFVFNDRRVSKRHCQIFFDGSLRKLYILSGILSNTGSAIDSKSRIVHEFR 116

Query: 176 E--------GERFKVRPSLNGVFVNGIRVGVGKVMELFTGDEVQFVCAN 298
           +         E F +  + NGVFVNG+ +  G  +EL  GD V  VC N
Sbjct: 117 KRVMMFSCGSEGFPILEASNGVFVNGVEIRKGMAVELMEGDRVSLVCGN 165


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