BLASTX nr result

ID: Cimicifuga21_contig00028801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028801
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310677.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-16
ref|XP_002272816.2| PREDICTED: probable LRR receptor-like serine...    60   9e-15
emb|CAN74435.1| hypothetical protein VITISV_041450 [Vitis vinifera]    59   3e-14
ref|XP_002270976.2| PREDICTED: probable LRR receptor-like serine...    59   4e-14
emb|CBI20543.3| unnamed protein product [Vitis vinifera]               59   4e-14

>ref|XP_002310677.1| predicted protein [Populus trichocarpa] gi|222853580|gb|EEE91127.1|
            predicted protein [Populus trichocarpa]
          Length = 1036

 Score = 72.8 bits (177), Expect(2) = 2e-16
 Identities = 37/61 (60%), Positives = 47/61 (77%)
 Frame = +2

Query: 92   RVVAILAGDIEVGTVTSKLGYLTDWQFDDISTFMNDDATSGSVTSKAPNSQFDSSSNTST 271
            RV+A+L+GDIEV +VTSK GYLTDW+FDD ST+M+DDAT  S T     S ++SS+ TS 
Sbjct: 958  RVIAMLSGDIEVNSVTSKPGYLTDWKFDDTSTYMSDDATRASDT-----SHYNSSTRTSL 1012

Query: 272  V 274
            V
Sbjct: 1013 V 1013



 Score = 37.4 bits (85), Expect(2) = 2e-16
 Identities = 15/29 (51%), Positives = 22/29 (75%)
 Frame = +3

Query: 3    LVDPSLTSFKEKEATQMLGVSLLCTQASP 89
            LVD  L+ F E+E  +++GV+LLCTQ +P
Sbjct: 922  LVDSRLSEFNEEEVNRLIGVALLCTQTAP 950


>ref|XP_002272816.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g56130-like [Vitis vinifera]
          Length = 1039

 Score = 60.5 bits (145), Expect(2) = 9e-15
 Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
 Frame = +2

Query: 92   RVVAILAGDIEVGTVTSKLGYLTDWQFDD-ISTFMNDDATSGSVTSKAPNSQFDSSSNTS 268
            RVVA+LAGDIEV TV SK  YLTDW F+D  S+F+++D  + S  +K+ ++    +SN S
Sbjct: 944  RVVAMLAGDIEVSTVASKPSYLTDWDFNDATSSFLSEDTQTSSAFNKSASNPTSFASNKS 1003

Query: 269  T 271
            T
Sbjct: 1004 T 1004



 Score = 44.3 bits (103), Expect(2) = 9e-15
 Identities = 19/29 (65%), Positives = 25/29 (86%)
 Frame = +3

Query: 3   LVDPSLTSFKEKEATQMLGVSLLCTQASP 89
           L+DP LT+F E EA +++GV+LLCTQASP
Sbjct: 908 LIDPRLTAFDENEAIRVVGVALLCTQASP 936


>emb|CAN74435.1| hypothetical protein VITISV_041450 [Vitis vinifera]
          Length = 957

 Score = 58.9 bits (141), Expect(2) = 3e-14
 Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
 Frame = +2

Query: 92   RVVAILAGDIEVGTVTSKLGYLTDWQFDD-ISTFMNDDATSGSVTSKAPNSQFDSSSNTS 268
            RVVA+LAGDIEV TV SK  YLTDW F+D  S+F+++D  + S  +++ ++    +SN S
Sbjct: 862  RVVAMLAGDIEVSTVASKPSYLTDWDFNDATSSFLSEDTQTSSAFNESASNPTSFASNKS 921

Query: 269  T 271
            T
Sbjct: 922  T 922



 Score = 44.3 bits (103), Expect(2) = 3e-14
 Identities = 19/29 (65%), Positives = 25/29 (86%)
 Frame = +3

Query: 3   LVDPSLTSFKEKEATQMLGVSLLCTQASP 89
           L+DP LT+F E EA +++GV+LLCTQASP
Sbjct: 826 LIDPRLTAFDENEAIRVVGVALLCTQASP 854


>ref|XP_002270976.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g56130-like [Vitis vinifera]
          Length = 993

 Score = 58.9 bits (141), Expect(2) = 4e-14
 Identities = 32/59 (54%), Positives = 37/59 (62%)
 Frame = +2

Query: 92   RVVAILAGDIEVGTVTSKLGYLTDWQFDDISTFMNDDATSGSVTSKAPNSQFDSSSNTS 268
            RVVA+LAGDIEV TV SK GYLTDW F DI+T    D T  SV S + +    +  N S
Sbjct: 923  RVVAMLAGDIEVSTVASKPGYLTDWDFKDITTSFLSDDTQTSVASTSTSYPAPTPVNLS 981



 Score = 43.5 bits (101), Expect(2) = 4e-14
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = +3

Query: 3   LVDPSLTSFKEKEATQMLGVSLLCTQASP 89
           LVDP LT+F E EA +++GV+LLC QASP
Sbjct: 887 LVDPKLTTFDENEAARVIGVALLCIQASP 915


>emb|CBI20543.3| unnamed protein product [Vitis vinifera]
          Length = 911

 Score = 58.9 bits (141), Expect(2) = 4e-14
 Identities = 32/59 (54%), Positives = 37/59 (62%)
 Frame = +2

Query: 92   RVVAILAGDIEVGTVTSKLGYLTDWQFDDISTFMNDDATSGSVTSKAPNSQFDSSSNTS 268
            RVVA+LAGDIEV TV SK GYLTDW F DI+T    D T  SV S + +    +  N S
Sbjct: 846  RVVAMLAGDIEVSTVASKPGYLTDWDFKDITTSFLSDDTQTSVASTSTSYPAPTPVNLS 904



 Score = 43.5 bits (101), Expect(2) = 4e-14
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = +3

Query: 3   LVDPSLTSFKEKEATQMLGVSLLCTQASP 89
           LVDP LT+F E EA +++GV+LLC QASP
Sbjct: 810 LVDPKLTTFDENEAARVIGVALLCIQASP 838


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