BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028796
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]   144   7e-33
ref|XP_002518274.1| conserved hypothetical protein [Ricinus comm...   114   8e-24
ref|XP_002517741.1| conserved hypothetical protein [Ricinus comm...    75   4e-23
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...    62   1e-19
ref|XP_002535828.1| conserved hypothetical protein [Ricinus comm...    60   2e-07

>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score =  144 bits (363), Expect = 7e-33
 Identities = 73/87 (83%), Positives = 75/87 (86%)
 Frame = +1

Query: 163 QLILRSPRQELPGDDRGTNPPAVAGRLFCFTIRPGRLSLPSVAYEFTSIPGRIQFPFDFS 342
           QLILRSPRQELPGDDRGTNPPAVAGRLFCFTIRPGRLSLPSVAYEFTSIPGR+QFPFDFS
Sbjct: 135 QLILRSPRQELPGDDRGTNPPAVAGRLFCFTIRPGRLSLPSVAYEFTSIPGRVQFPFDFS 194

Query: 343 LVAVTRIRASVSTPPQTDLTRNPFSRT 423
           LVAVTRIRA    P     TR   SR+
Sbjct: 195 LVAVTRIRARAPLPAYPYKTRVGGSRS 221


>ref|XP_002518274.1| conserved hypothetical protein [Ricinus communis]
           gi|223542494|gb|EEF44034.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score =  114 bits (285), Expect = 8e-24
 Identities = 72/137 (52%), Positives = 75/137 (54%), Gaps = 4/137 (2%)
 Frame = +3

Query: 57  PHFL*KGQKKCLHLLPTVFLRNYTERVDPPLPFVLATYPKVSSXXXXXXXXXXXXXCCGG 236
           PHFL K  KK LHLLPTVFL+N  ERVDPP  FVLATYPKVSS             CCGG
Sbjct: 20  PHFLLKRPKKGLHLLPTVFLQNLIERVDPPPHFVLATYPKVSSLRVPRRRQKNQPVCCGG 79

Query: 237 AAFLFHNKTWTIIP---TLGSLRVYVHPWSDTVSFRF-LPCSRYPNSRKCVHTPPN*LDE 404
           A F F     TI P   +L S+          V F F          R  V TPPN LDE
Sbjct: 80  ALFFF-----TIRPGRLSLPSVACKFMSVPSRVQFPFDFSLVAVTRIRTSVSTPPNLLDE 134

Query: 405 ESILANKHTPYTHLGAP 455
           ESIL NKH PYTHL AP
Sbjct: 135 ESILVNKHNPYTHLEAP 151


>ref|XP_002517741.1| conserved hypothetical protein [Ricinus communis]
           gi|223543139|gb|EEF44673.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 111

 Score = 75.1 bits (183), Expect(3) = 4e-23
 Identities = 40/57 (70%), Positives = 43/57 (75%)
 Frame = -1

Query: 246 KKPPRHSRRVGSSVVAGELLARRP*DKLLKQTGGEDRPVQYNSEERLLAAGGDISFA 76
           K  P HSRRVGSS+VAG+LL RRP    LKQ G EDRPVQ N EERLLA GGD+S A
Sbjct: 37  KIAPHHSRRVGSSIVAGQLLVRRP--YFLKQKGEEDRPVQSNFEERLLAVGGDLSLA 91



 Score = 57.0 bits (136), Expect(3) = 4e-23
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -2

Query: 395 SVWGGVDTLARIRVTATREKSKGNCIRPGMD 303
           S +GG+DTLA+IRVTATREKSKGNC RPGMD
Sbjct: 6   SKFGGMDTLAQIRVTATREKSKGNCTRPGMD 36



 Score = 21.2 bits (43), Expect(3) = 4e-23
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -3

Query: 412 MDSSSSQFGGVWT 374
           M+SSSS+FGG+ T
Sbjct: 1   MNSSSSKFGGMDT 13


>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score = 62.4 bits (150), Expect(2) = 1e-19
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -2

Query: 386 GGVDTLARIRVTATREKSKGNCIRPGMDVNS 294
           GGVDTLARIRVTATREKSKGNC +PGMDVNS
Sbjct: 212 GGVDTLARIRVTATREKSKGNCTQPGMDVNS 242



 Score = 58.5 bits (140), Expect(2) = 1e-19
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = -1

Query: 456 GVLLGVCRGCVCSREWIPRQVSLGG 382
           GVLLGVCRGCVCSREWIPRQVSLGG
Sbjct: 189 GVLLGVCRGCVCSREWIPRQVSLGG 213


>ref|XP_002535828.1| conserved hypothetical protein [Ricinus communis]
           gi|255608154|ref|XP_002538850.1| conserved hypothetical
           protein [Ricinus communis] gi|223510119|gb|EEF23533.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223521805|gb|EEF26555.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 86

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = -2

Query: 395 SVWGGVDTLARIRVTATREKSKGNCIRPGMD 303
           S +GGVDTLARIRVTATREKSKGNC RPGMD
Sbjct: 6   SKFGGVDTLARIRVTATREKSKGNCTRPGMD 36