BLASTX nr result

ID: Cimicifuga21_contig00028791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028791
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA81866.1| unknown [Solanum tuberosum]                             67   1e-09
gb|AFG68153.1| Pinus taeda anonymous locus 2_9134_01 genomic seq...    64   1e-08
gb|AFG68151.1| Pinus taeda anonymous locus 2_9134_01 genomic seq...    64   1e-08
ref|XP_004157284.1| PREDICTED: mitochondrial import inner membra...    64   2e-08
ref|XP_004135673.1| PREDICTED: mitochondrial import inner membra...    64   2e-08

>gb|ABA81866.1| unknown [Solanum tuberosum]
          Length = 236

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 35/62 (56%), Positives = 46/62 (74%), Gaps = 10/62 (16%)
 Frame = -1

Query: 311 RHKDDPWNSIISGAAVGGCVQMRRGV---SRWAVFGGGILALLEGAYVMM-------KNF 162
           R K+DPWNSII+GAA GG +QMR+G+   SR A+FGG +LAL+EGA +M+       +NF
Sbjct: 84  RQKEDPWNSIIAGAATGGFLQMRQGLGAASRSAMFGGVLLALIEGAGIMLNKVMSAPQNF 143

Query: 161 PP 156
           PP
Sbjct: 144 PP 145


>gb|AFG68153.1| Pinus taeda anonymous locus 2_9134_01 genomic sequence
          Length = 134

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 10/62 (16%)
 Frame = -1

Query: 311 RHKDDPWNSIISGAAVGGCVQMRRG---VSRWAVFGGGILALLEGAYVMM-------KNF 162
           R K+DPWNSII+GAA GG +QMR+G    +R A+FGG +LAL+EGA +M+       + F
Sbjct: 46  RQKEDPWNSIIAGAATGGFLQMRQGPRAATRSAIFGGVLLALIEGAGIMLNRVLSAQQQF 105

Query: 161 PP 156
           PP
Sbjct: 106 PP 107


>gb|AFG68151.1| Pinus taeda anonymous locus 2_9134_01 genomic sequence
           gi|383169907|gb|AFG68152.1| Pinus taeda anonymous locus
           2_9134_01 genomic sequence gi|383169911|gb|AFG68154.1|
           Pinus taeda anonymous locus 2_9134_01 genomic sequence
           gi|383169913|gb|AFG68155.1| Pinus taeda anonymous locus
           2_9134_01 genomic sequence gi|383169915|gb|AFG68156.1|
           Pinus taeda anonymous locus 2_9134_01 genomic sequence
           gi|383169917|gb|AFG68157.1| Pinus taeda anonymous locus
           2_9134_01 genomic sequence gi|383169919|gb|AFG68158.1|
           Pinus taeda anonymous locus 2_9134_01 genomic sequence
           gi|383169921|gb|AFG68159.1| Pinus taeda anonymous locus
           2_9134_01 genomic sequence gi|383169923|gb|AFG68160.1|
           Pinus taeda anonymous locus 2_9134_01 genomic sequence
           gi|383169925|gb|AFG68161.1| Pinus taeda anonymous locus
           2_9134_01 genomic sequence gi|383169927|gb|AFG68162.1|
           Pinus taeda anonymous locus 2_9134_01 genomic sequence
           gi|383169929|gb|AFG68163.1| Pinus taeda anonymous locus
           2_9134_01 genomic sequence gi|383169931|gb|AFG68164.1|
           Pinus taeda anonymous locus 2_9134_01 genomic sequence
           gi|383169933|gb|AFG68165.1| Pinus taeda anonymous locus
           2_9134_01 genomic sequence
          Length = 134

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 10/62 (16%)
 Frame = -1

Query: 311 RHKDDPWNSIISGAAVGGCVQMRRG---VSRWAVFGGGILALLEGAYVMM-------KNF 162
           R K+DPWNSII+GAA GG +QMR+G    +R A+FGG +LAL+EGA +M+       + F
Sbjct: 46  RQKEDPWNSIIAGAATGGFLQMRQGPRAATRSAIFGGVLLALIEGAGIMLNRVLSAQQQF 105

Query: 161 PP 156
           PP
Sbjct: 106 PP 107


>ref|XP_004157284.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Cucumis sativus]
          Length = 226

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/50 (62%), Positives = 41/50 (82%), Gaps = 3/50 (6%)
 Frame = -1

Query: 311 RHKDDPWNSIISGAAVGGCVQMRRGV---SRWAVFGGGILALLEGAYVMM 171
           R K+DPWNSII+GAA GG +QMR+GV   +R A+FGG +LAL+EGA +M+
Sbjct: 84  RQKEDPWNSIIAGAATGGFLQMRQGVGASARSALFGGVLLALIEGAGIML 133


>ref|XP_004135673.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Cucumis sativus]
          Length = 226

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/50 (62%), Positives = 41/50 (82%), Gaps = 3/50 (6%)
 Frame = -1

Query: 311 RHKDDPWNSIISGAAVGGCVQMRRGV---SRWAVFGGGILALLEGAYVMM 171
           R K+DPWNSII+GAA GG +QMR+GV   +R A+FGG +LAL+EGA +M+
Sbjct: 84  RQKEDPWNSIIAGAATGGFLQMRQGVGASARSALFGGVLLALIEGAGIML 133


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