BLASTX nr result

ID: Cimicifuga21_contig00028739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028739
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...    96   3e-18
ref|XP_003533361.1| PREDICTED: ABC transporter C family member 4...    93   2e-17
ref|XP_003547376.1| PREDICTED: ABC transporter C family member 4...    92   6e-17
ref|XP_003628563.1| Multidrug resistance protein ABC transporter...    82   3e-14
ref|XP_004152254.1| PREDICTED: ABC transporter C family member 4...    80   1e-13

>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 52/98 (53%), Positives = 63/98 (64%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   IFLSPCPQHALFASIDLFFLLVLIAFSIHNLFSRTHSNDRN----------NNISHLRTT 150
           IFLSPCPQ AL +SIDL FLL LIAFS+  L+SR  SN R+          NN + LRTT
Sbjct: 35  IFLSPCPQRALLSSIDLLFLLTLIAFSVQKLYSRFISNGRSSSAINKPLIRNNRARLRTT 94

Query: 151 VWFKVPFILTALLAISYTVLAVLAFTEVAQSSWKLNEA 264
           +WFK+    TALLA+ +  L +LAF   AQ  WKL +A
Sbjct: 95  LWFKLTLTATALLAVCHGFLCILAFARGAQMPWKLIDA 132


>ref|XP_003533361.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1506

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/98 (48%), Positives = 64/98 (65%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   IFLSPCPQHALFASIDLFFLLVLIAFSIHNLFSRTHSNDRNNNI----------SHLRTT 150
           I LSPCPQ  L +++D  FLL L+AF+   L+SR  SN  +NN           S  + T
Sbjct: 37  ILLSPCPQRVLLSAVDSIFLLSLLAFAAVKLYSRFTSNTTSNNTITKPLLQEKDSDYKVT 96

Query: 151 VWFKVPFILTALLAISYTVLAVLAFTEVAQSSWKLNEA 264
            WFK+P ++T LLAI+YTVL++LAFT+ + SSWKL EA
Sbjct: 97  FWFKLPLLVTTLLAIAYTVLSILAFTQTSLSSWKLIEA 134


>ref|XP_003547376.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1501

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/98 (47%), Positives = 64/98 (65%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   IFLSPCPQHALFASIDLFFLLVLIAFSIHNLFSRTHSNDRNNNI----------SHLRTT 150
           IFLSPCPQ  L +++D  FLL L+AF+   L+SR  SN  +N+           S  + T
Sbjct: 37  IFLSPCPQRVLLSAVDSIFLLSLLAFAAAKLYSRFTSNATSNSTITKPLLQEKDSDYKVT 96

Query: 151 VWFKVPFILTALLAISYTVLAVLAFTEVAQSSWKLNEA 264
            WFK+P ++T LLAI+YTVL++LAFT+ +  SWKL EA
Sbjct: 97  FWFKLPLLVTTLLAIAYTVLSILAFTQTSLPSWKLIEA 134


>ref|XP_003628563.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula] gi|355522585|gb|AET03039.1| Multidrug
           resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 1498

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 43/95 (45%), Positives = 60/95 (63%), Gaps = 7/95 (7%)
 Frame = +1

Query: 1   IFLSPCPQHALFASIDLFFLLVLIAFSIHNLFSRTHSNDR------NNNISHLRTTVWFK 162
           +FLSPCPQ  L +++D  FLL L+A ++H L+SR ++             S  R T+WFK
Sbjct: 35  LFLSPCPQRLLLSALDSLFLLSLLASAVHKLYSRANTTSSITKPLLKEKDSDYRVTLWFK 94

Query: 163 VPFILTALLAISYTVLAVLAFTEVAQ-SSWKLNEA 264
           +  ++T LLAI+YTVL +LAFT+    SSWK  EA
Sbjct: 95  LTLLVTTLLAITYTVLGILAFTQTNNLSSWKQIEA 129


>ref|XP_004152254.1| PREDICTED: ABC transporter C family member 4-like [Cucumis sativus]
           gi|449484283|ref|XP_004156839.1| PREDICTED: ABC
           transporter C family member 4-like [Cucumis sativus]
          Length = 1507

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 10/95 (10%)
 Frame = +1

Query: 1   IFLSPCPQHALFASIDLFFLLVLIAFSIHNLFSRTHSNDR-NNNISH---------LRTT 150
           IFLSPC Q  L +S+DL FL+VL+AF++  LFSR  S DR N++IS          + TT
Sbjct: 35  IFLSPCAQRVLLSSVDLLFLVVLLAFALQKLFSRFRSGDRMNSDISKPLIGSNRPLITTT 94

Query: 151 VWFKVPFILTALLAISYTVLAVLAFTEVAQSSWKL 255
           + FK+  I++ +L I Y V+++L F+   QS+W++
Sbjct: 95  ILFKLSLIVSGMLTICYLVISILTFSSSVQSTWRI 129


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