BLASTX nr result

ID: Cimicifuga21_contig00028709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028709
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               77   1e-12
emb|CAN80686.1| hypothetical protein VITISV_033813 [Vitis vinifera]    77   1e-12
ref|XP_003604534.1| NBS-containing resistance-like protein [Medi...    76   3e-12
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]    75   6e-12
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]    73   3e-11

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/67 (55%), Positives = 46/67 (68%)
 Frame = -3

Query: 202  HARTKHIEVDYHFIRDLVTSGALKVLYISSADQVADIFTKGLPKSLYEIFKYKLSVISPP 23
            H+RTKHIEVDYH++RD V    L V Y+S+ADQ ADIFTKGL    ++    KL V + P
Sbjct: 1310 HSRTKHIEVDYHYVRDKVVRQELAVSYVSTADQTADIFTKGLSTQRFQFLASKLPVRARP 1369

Query: 22   FSLRGTN 2
             SLRG +
Sbjct: 1370 LSLRGND 1376


>emb|CAN80686.1| hypothetical protein VITISV_033813 [Vitis vinifera]
          Length = 370

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/68 (54%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
 Frame = -3

Query: 202 HARTKHIEVDYHFIRDLVTSGALKVLYISSADQVADIFTKGLPKSLYEIFKYKLSVISPP 23
           HAR+KHIE+DYHF+R+ V SG L   ++ S+ QVADIFTK LPK+ +++F++KL V   P
Sbjct: 295 HARSKHIELDYHFVREKVASGVLITHFLPSSLQVADIFTKALPKTSFQVFRFKLGVHKLP 354

Query: 22  F-SLRGTN 2
             SLRG +
Sbjct: 355 LTSLRGAD 362


>ref|XP_003604534.1| NBS-containing resistance-like protein [Medicago truncatula]
           gi|355505589|gb|AES86731.1| NBS-containing
           resistance-like protein [Medicago truncatula]
          Length = 1302

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/66 (51%), Positives = 47/66 (71%)
 Frame = -3

Query: 202 HARTKHIEVDYHFIRDLVTSGALKVLYISSADQVADIFTKGLPKSLYEIFKYKLSVISPP 23
           H RTKHIE+D HF+R+ V  G ++VL++ S  Q+ADIFTKGLP  L++ F+  L++  PP
Sbjct: 508 HQRTKHIEMDIHFVREKVARGQVRVLHVPSRYQIADIFTKGLPLQLFDDFRDSLNIRQPP 567

Query: 22  FSLRGT 5
            S  GT
Sbjct: 568 VSTTGT 573


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 38/65 (58%), Positives = 46/65 (70%)
 Frame = -3

Query: 202  HARTKHIEVDYHFIRDLVTSGALKVLYISSADQVADIFTKGLPKSLYEIFKYKLSVISPP 23
            HARTKHIE+D HFIRD V    L + Y+ SA+QVADIFTK +  S +  F+ KLSV+  P
Sbjct: 1160 HARTKHIEMDLHFIRDHVLRKQLVIQYLPSAEQVADIFTKHISSSQFLSFRTKLSVVPSP 1219

Query: 22   FSLRG 8
             SLRG
Sbjct: 1220 VSLRG 1224


>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
          Length = 1239

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
 Frame = -3

Query: 202  HARTKHIEVDYHFIRDLVTSGALKVLYISSADQVADIFTKGLPKSLYEIFKYKLSVIS-P 26
            H R KH+E+DYHF+R+LV +G L+  Y+ S  QVADIFTK + + L+E F+ KL + S P
Sbjct: 1155 HKRAKHVELDYHFLRELVVAGKLRTEYVPSHLQVADIFTKSVSRPLFEFFRSKLHIRSNP 1214

Query: 25   PFSLRG 8
              SLRG
Sbjct: 1215 TLSLRG 1220


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