BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028638
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002979356.1| hypothetical protein SELMODRAFT_110614 [Sela...   201   1e-49
ref|XP_002990330.1| hypothetical protein SELMODRAFT_131541 [Sela...   201   1e-49
ref|XP_001758783.1| class II RPD3 type histone deacetylase prote...   197   1e-48
ref|XP_003524633.1| PREDICTED: histone deacetylase 5-like [Glyci...   197   2e-48
ref|XP_003550702.1| PREDICTED: histone deacetylase 5-like [Glyci...   196   4e-48

>ref|XP_002979356.1| hypothetical protein SELMODRAFT_110614 [Selaginella moellendorffii]
           gi|300153124|gb|EFJ19764.1| hypothetical protein
           SELMODRAFT_110614 [Selaginella moellendorffii]
          Length = 630

 Score =  201 bits (511), Expect = 1e-49
 Identities = 95/157 (60%), Positives = 113/157 (71%), Gaps = 4/157 (2%)
 Frame = +2

Query: 224 VAQGTFFKSAVTIVRPPGHHAERGKAMGFCLLNNVAIAAKYL----LEEIGIAKLLIVDW 391
           VA+G    SA  IVRPPGHHAE  +AMGFCL NNVA+AA+ L    +   G  K+LIVDW
Sbjct: 119 VARGEL-ASAAAIVRPPGHHAEADEAMGFCLFNNVAVAAQILSSGKVSVAGSHKVLIVDW 177

Query: 392 DIHHGNGTQRMFWTDDEVMYFSVHRYDSGEFYPGGHYGSLDRIGKG*GKGYTINVPWEGK 571
           D+HHGNGTQ MFW D  V+YFSVHRYD G FYPGG  G+ D++G G G G+ INVPW   
Sbjct: 178 DVHHGNGTQNMFWQDPNVLYFSVHRYDDGYFYPGGQEGNFDKVGGGAGAGFNINVPWPRG 237

Query: 572 GYSDSYYFLVWKHVLLPVVGAFEPDMILISGGSDSGK 682
           GYSD+ Y  VW+HVL+PV   F PD++LISGG DS +
Sbjct: 238 GYSDADYVAVWEHVLMPVAREFNPDIVLISGGFDSAR 274


>ref|XP_002990330.1| hypothetical protein SELMODRAFT_131541 [Selaginella moellendorffii]
           gi|300141892|gb|EFJ08599.1| hypothetical protein
           SELMODRAFT_131541 [Selaginella moellendorffii]
          Length = 630

 Score =  201 bits (511), Expect = 1e-49
 Identities = 95/157 (60%), Positives = 113/157 (71%), Gaps = 4/157 (2%)
 Frame = +2

Query: 224 VAQGTFFKSAVTIVRPPGHHAERGKAMGFCLLNNVAIAAKYL----LEEIGIAKLLIVDW 391
           VA+G    SA  IVRPPGHHAE  +AMGFCL NNVA+AA+ L    +   G  K+LIVDW
Sbjct: 119 VARGEL-ASAAAIVRPPGHHAEADEAMGFCLFNNVAVAAQILSSGKVSVAGSHKVLIVDW 177

Query: 392 DIHHGNGTQRMFWTDDEVMYFSVHRYDSGEFYPGGHYGSLDRIGKG*GKGYTINVPWEGK 571
           D+HHGNGTQ MFW D  V+YFSVHRYD G FYPGG  G+ D++G G G G+ INVPW   
Sbjct: 178 DVHHGNGTQNMFWQDPNVLYFSVHRYDDGYFYPGGQEGNFDKVGGGAGAGFNINVPWPRG 237

Query: 572 GYSDSYYFLVWKHVLLPVVGAFEPDMILISGGSDSGK 682
           GYSD+ Y  VW+HVL+PV   F PD++LISGG DS +
Sbjct: 238 GYSDADYVAVWEHVLMPVAREFNPDIVLISGGFDSAR 274


>ref|XP_001758783.1| class II RPD3 type histone deacetylase protein [Physcomitrella
           patens subsp. patens] gi|162689920|gb|EDQ76289.1| class
           II RPD3 type histone deacetylase protein [Physcomitrella
           patens subsp. patens]
          Length = 577

 Score =  197 bits (502), Expect = 1e-48
 Identities = 91/159 (57%), Positives = 112/159 (70%), Gaps = 3/159 (1%)
 Frame = +2

Query: 215 AKLVAQGTFFKSAVTIVRPPGHHAERGKAMGFCLLNNVAIAAKYLLEE---IGIAKLLIV 385
           A  VA+G    S   ++RPPGHHAE  + MGFCLLNNVA+AA  L  E   +G+ K+LIV
Sbjct: 116 ATQVAEGKL-ASGACVIRPPGHHAEADRPMGFCLLNNVAVAAHILAHEKTELGVKKVLIV 174

Query: 386 DWDIHHGNGTQRMFWTDDEVMYFSVHRYDSGEFYPGGHYGSLDRIGKG*GKGYTINVPWE 565
           DWD+HHGNGTQ MFWTD +VMYFSVHR+D G FYP G+ G+   +G   GKGY INVPW 
Sbjct: 175 DWDVHHGNGTQHMFWTDPQVMYFSVHRFDQGRFYPPGNDGNCTEVGGEEGKGYNINVPWP 234

Query: 566 GKGYSDSYYFLVWKHVLLPVVGAFEPDMILISGGSDSGK 682
            K Y D+ Y  VWK++L+PV   F PD++LIS G DS +
Sbjct: 235 NKDYGDADYLAVWKYILMPVARQFNPDIVLISAGFDSAR 273


>ref|XP_003524633.1| PREDICTED: histone deacetylase 5-like [Glycine max]
          Length = 656

 Score =  197 bits (500), Expect = 2e-48
 Identities = 88/146 (60%), Positives = 109/146 (74%), Gaps = 3/146 (2%)
 Frame = +2

Query: 248 SAVTIVRPPGHHAERGKAMGFCLLNNVAIAAKYLLEE---IGIAKLLIVDWDIHHGNGTQ 418
           SAV IVRPPGHHAE+ +AMGFCL NNVA+AA+YLL+E   +G+ K+LIVDWD+HHGNGTQ
Sbjct: 139 SAVAIVRPPGHHAEQNEAMGFCLFNNVAVAARYLLDERPELGVKKILIVDWDVHHGNGTQ 198

Query: 419 RMFWTDDEVMYFSVHRYDSGEFYPGGHYGSLDRIGKG*GKGYTINVPWEGKGYSDSYYFL 598
           +MFW D  V++FSVHR++ G FYP    G    IG+G G GY INVPWE     D+ YF 
Sbjct: 199 KMFWNDSRVLFFSVHRHEFGSFYPANDDGFYTMIGEGAGAGYNINVPWENGRCGDADYFA 258

Query: 599 VWKHVLLPVVGAFEPDMILISGGSDS 676
           VW H+LLPV   F PD+I++S G D+
Sbjct: 259 VWDHILLPVAKEFNPDIIIVSAGFDA 284


>ref|XP_003550702.1| PREDICTED: histone deacetylase 5-like [Glycine max]
          Length = 652

 Score =  196 bits (498), Expect = 4e-48
 Identities = 88/146 (60%), Positives = 109/146 (74%), Gaps = 3/146 (2%)
 Frame = +2

Query: 248 SAVTIVRPPGHHAERGKAMGFCLLNNVAIAAKYLLEE---IGIAKLLIVDWDIHHGNGTQ 418
           SAV IVRPPGHHAE+ +AMGFCL NNVA+AA+YLL+E   +G+ K+LIVDWD+HHGNGTQ
Sbjct: 135 SAVAIVRPPGHHAEQQEAMGFCLFNNVAVAARYLLDERPELGVKKILIVDWDVHHGNGTQ 194

Query: 419 RMFWTDDEVMYFSVHRYDSGEFYPGGHYGSLDRIGKG*GKGYTINVPWEGKGYSDSYYFL 598
           +MFW D  V++FSVHR++ G FYP    G    IG+G G GY INVPWE     D+ YF 
Sbjct: 195 KMFWNDSRVLFFSVHRHEFGSFYPANDDGFYTMIGEGAGAGYNINVPWENGRCGDADYFA 254

Query: 599 VWKHVLLPVVGAFEPDMILISGGSDS 676
           VW H+LLPV   F PD+I++S G D+
Sbjct: 255 VWDHILLPVAKEFNPDIIIVSAGFDA 280