BLASTX nr result

ID: Cimicifuga21_contig00028623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028623
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815...    70   2e-10
ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...    69   3e-10
ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containin...    69   3e-10
ref|XP_002313012.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|NP_190681.6| zinc finger CCCH domain-containing protein 44 [...    67   1e-09

>ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815079 [Glycine max]
          Length = 1421

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/61 (52%), Positives = 42/61 (68%)
 Frame = +3

Query: 195  WLYEDPFGKTQGPFSLNQLRIWSKTDHFPLDLKIWRPSEDQEKSILLIASLVLSYSPNWS 374
            W Y+DP GK QGPFS+ QL  WS T +FP DL+IWR +E Q+ SILL  +L  ++S   S
Sbjct: 870  WHYQDPSGKVQGPFSMVQLHKWSNTGYFPADLRIWRTTEKQDDSILLTDALAGNFSKEPS 929

Query: 375  L 377
            +
Sbjct: 930  I 930


>ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 19-like [Cucumis sativus]
          Length = 1475

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/47 (63%), Positives = 36/47 (76%)
 Frame = +3

Query: 195  WLYEDPFGKTQGPFSLNQLRIWSKTDHFPLDLKIWRPSEDQEKSILL 335
            W Y+DP GK QGPFS+ QLR WS T +FP DL+IWR S+ QE S+LL
Sbjct: 895  WHYQDPSGKVQGPFSMVQLRKWSNTGYFPTDLRIWRISDQQEDSLLL 941


>ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
            [Cucumis sativus]
          Length = 1470

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/47 (63%), Positives = 36/47 (76%)
 Frame = +3

Query: 195  WLYEDPFGKTQGPFSLNQLRIWSKTDHFPLDLKIWRPSEDQEKSILL 335
            W Y+DP GK QGPFS+ QLR WS T +FP DL+IWR S+ QE S+LL
Sbjct: 895  WHYQDPSGKVQGPFSMVQLRKWSNTGYFPTDLRIWRISDQQEDSLLL 941


>ref|XP_002313012.1| predicted protein [Populus trichocarpa] gi|222849420|gb|EEE86967.1|
           predicted protein [Populus trichocarpa]
          Length = 746

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/51 (58%), Positives = 38/51 (74%)
 Frame = +3

Query: 195 WLYEDPFGKTQGPFSLNQLRIWSKTDHFPLDLKIWRPSEDQEKSILLIASL 347
           W Y+DP GK QGPFS+ QLR WS T +FP DL+IWR +E ++ SILL  +L
Sbjct: 184 WHYKDPSGKNQGPFSMVQLRKWSNTGYFPADLRIWRNTETKDDSILLTDAL 234


>ref|NP_190681.6| zinc finger CCCH domain-containing protein 44 [Arabidopsis
           thaliana] gi|334302924|sp|Q9SD34.3|C3H44_ARATH RecName:
           Full=Zinc finger CCCH domain-containing protein 44;
           Short=AtC3H44 gi|332645232|gb|AEE78753.1| zinc finger
           CCCH domain-containing protein 44 [Arabidopsis thaliana]
          Length = 1292

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/70 (44%), Positives = 43/70 (61%)
 Frame = +3

Query: 189 DAWLYEDPFGKTQGPFSLNQLRIWSKTDHFPLDLKIWRPSEDQEKSILLIASLVLSYSPN 368
           + W Y DP GKTQGPFS+ QLR W  + HFP  L+IWR  E+Q++S+LL  +L   +   
Sbjct: 717 EIWHYRDPTGKTQGPFSMVQLRRWKSSGHFPPYLRIWRAHENQDESVLLTDALAGRFDKA 776

Query: 369 WSLGKAGGEP 398
            +L  +   P
Sbjct: 777 TTLPSSSSLP 786


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