BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028540
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana ta...   174   7e-42
ref|YP_002608193.1| succinate dehydrogenase subunit 3 [Carica pa...   173   1e-41
ref|YP_006460151.1| succinate dehydrogenase subunit 3 (mitochond...   172   3e-41
gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Sola...   172   3e-41
ref|YP_002608354.1| succinate dehydrogenase subunit 3 [Vitis vin...   167   1e-39

>ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum]
           gi|57013992|ref|YP_173464.1| succinate dehydrogenase
           subunit 3 [Nicotiana tabacum]
           gi|57014032|ref|YP_173503.1| succinate dehydrogenase
           subunit 3 [Nicotiana tabacum]
           gi|56806628|dbj|BAD83529.1| succinate dehydrogenase
           subunit 3 (mitochondrion) [Nicotiana tabacum]
           gi|56806668|dbj|BAD83569.1| succinate dehydrogenase
           subunit 3 (mitochondrion) [Nicotiana tabacum]
          Length = 108

 Score =  174 bits (441), Expect = 7e-42
 Identities = 89/111 (80%), Positives = 94/111 (84%)
 Frame = +1

Query: 58  MNLLRPLSPHLPIYKPQLTSTFPISHRISGAFLATIVLFSYILYLKIGLICFTYYNFYQF 237
           MN+LRPLSPHLPIYKPQLTSTF ISHRISGAFLATIV F Y+L LKIGLICFTY NFYQF
Sbjct: 1   MNILRPLSPHLPIYKPQLTSTFSISHRISGAFLATIVFFFYLLCLKIGLICFTYENFYQF 60

Query: 238 LFYSSKLILISVEMTALALFYHLSNGVRHLWTDFSGLIYCSLIRFARKRWK 390
            FYSSKLILISVE+TALAL YHL NGVRHL TDFSG  +   +R  RKR K
Sbjct: 61  FFYSSKLILISVEITALALSYHLYNGVRHLLTDFSGFFF---LRIGRKRLK 108


>ref|YP_002608193.1| succinate dehydrogenase subunit 3 [Carica papaya]
           gi|170522372|gb|ACB20482.1| succinate dehydrogenase
           subunit 3 (mitochondrion) [Carica papaya]
          Length = 108

 Score =  173 bits (438), Expect = 1e-41
 Identities = 87/111 (78%), Positives = 93/111 (83%)
 Frame = +1

Query: 58  MNLLRPLSPHLPIYKPQLTSTFPISHRISGAFLATIVLFSYILYLKIGLICFTYYNFYQF 237
           MN+LRPLSPHLPIYKPQLTSTFPISHRISGAFLATIVLF Y+  LKIG ICFTY NFYQF
Sbjct: 1   MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATIVLFFYLFCLKIGFICFTYENFYQF 60

Query: 238 LFYSSKLILISVEMTALALFYHLSNGVRHLWTDFSGLIYCSLIRFARKRWK 390
            FYSSKLILIS E+ ALAL YHL NGVRHL TDFSG ++   +R  RKR K
Sbjct: 61  FFYSSKLILISAEIAALALSYHLYNGVRHLLTDFSGFLF---LRIGRKRLK 108


>ref|YP_006460151.1| succinate dehydrogenase subunit 3 (mitochondrion) [Mimulus
           guttatus] gi|340007673|gb|AEK26537.1| succinate
           dehydrogenase subunit 3 (mitochondrion) [Mimulus
           guttatus]
          Length = 111

 Score =  172 bits (436), Expect = 3e-41
 Identities = 88/118 (74%), Positives = 96/118 (81%)
 Frame = +1

Query: 37  RNKIRLPMNLLRPLSPHLPIYKPQLTSTFPISHRISGAFLATIVLFSYILYLKIGLICFT 216
           + KI+  MN+LRPLSPHLPIYKPQLTSTFPISHRISGAFLATI+ F Y+L LKIGLICFT
Sbjct: 2   KKKIQPKMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATILFFFYLLCLKIGLICFT 61

Query: 217 YYNFYQFLFYSSKLILISVEMTALALFYHLSNGVRHLWTDFSGLIYCSLIRFARKRWK 390
           Y N  Q +FYSSKLILISVE+TALAL YH+ NGVRHL TDFSG        F RKRWK
Sbjct: 62  YENVCQLIFYSSKLILISVEITALALSYHIYNGVRHLLTDFSG--------FGRKRWK 111


>gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Solanum lycopersicum]
           gi|316996003|dbj|BAD83440.2| succinate dehydrogenase
           subunit 3 (mitochondrion) [Nicotiana tabacum]
          Length = 108

 Score =  172 bits (435), Expect = 3e-41
 Identities = 88/111 (79%), Positives = 93/111 (83%)
 Frame = +1

Query: 58  MNLLRPLSPHLPIYKPQLTSTFPISHRISGAFLATIVLFSYILYLKIGLICFTYYNFYQF 237
           MN+LRPLSPHLPIYKPQLTSTF I HRISGAFLATIV F Y+L LKIGLICFTY NFYQF
Sbjct: 1   MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATIVFFFYLLCLKIGLICFTYENFYQF 60

Query: 238 LFYSSKLILISVEMTALALFYHLSNGVRHLWTDFSGLIYCSLIRFARKRWK 390
            FYSSKLILISVE+TALAL YHL NGVRHL TDFSG  +   +R  RKR K
Sbjct: 61  FFYSSKLILISVEITALALSYHLYNGVRHLLTDFSGFFF---LRIGRKRLK 108


>ref|YP_002608354.1| succinate dehydrogenase subunit 3 [Vitis vinifera]
           gi|209954150|emb|CAQ77586.1| succinate dehydrogenase
           subunit 3 [Vitis vinifera] gi|239764777|gb|ACS15245.1|
           succinate dehydrogenase subunit 3 [Vitis vinifera]
          Length = 168

 Score =  167 bits (422), Expect = 1e-39
 Identities = 83/105 (79%), Positives = 90/105 (85%)
 Frame = +1

Query: 40  NKIRLPMNLLRPLSPHLPIYKPQLTSTFPISHRISGAFLATIVLFSYILYLKIGLICFTY 219
           N I    N+LRPLSPHLPIYKPQLTSTFPI HRISGAFLAT+VLF Y+L LKIGLICFTY
Sbjct: 56  NLINNRKNILRPLSPHLPIYKPQLTSTFPIYHRISGAFLATLVLFFYLLCLKIGLICFTY 115

Query: 220 YNFYQFLFYSSKLILISVEMTALALFYHLSNGVRHLWTDFSGLIY 354
            NFYQF F+SSKLILISV +TALAL YHL NGVRHL TDFSG ++
Sbjct: 116 ENFYQFFFFSSKLILISVGITALALSYHLYNGVRHLLTDFSGFLF 160