BLASTX nr result

ID: Cimicifuga21_contig00028521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028521
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517613.1| pentatricopeptide repeat-containing protein,...   160   8e-38
ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
dbj|BAJ53230.1| JHL06P13.10 [Jatropha curcas]                         154   7e-36
ref|XP_002298105.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36

>ref|XP_002517613.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543245|gb|EEF44777.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 400

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/89 (85%), Positives = 85/89 (95%)
 Frame = +1

Query: 58  KRPALVKLKKERDPEKLFHLFKANAQNRLVVENRFAFEDTVSRLAGARRFDYIEHLLEQQ 237
           + PAL KLK ERDPEKLF+LFKANA+NRLV+ENRFAFEDT+SRLAGARRFDYIEHLLE Q
Sbjct: 38  EEPALAKLKAERDPEKLFNLFKANARNRLVIENRFAFEDTISRLAGARRFDYIEHLLEHQ 97

Query: 238 KSLPQGRREGFIVRIILLYGKAGMTKHAI 324
           K+LPQGRREGFI+RII+LYGKAGMTKHA+
Sbjct: 98  KTLPQGRREGFIIRIIMLYGKAGMTKHAV 126


>ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
           gi|449484169|ref|XP_004156805.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
          Length = 399

 Score =  159 bits (403), Expect = 2e-37
 Identities = 77/91 (84%), Positives = 84/91 (92%)
 Frame = +1

Query: 52  TFKRPALVKLKKERDPEKLFHLFKANAQNRLVVENRFAFEDTVSRLAGARRFDYIEHLLE 231
           + + PALVKLK ERDPEKLFHLFKANA NRLV+ENRFAFEDTVSRLAGARRFDYIEHLLE
Sbjct: 35  SLEEPALVKLKAERDPEKLFHLFKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLE 94

Query: 232 QQKSLPQGRREGFIVRIILLYGKAGMTKHAI 324
            QK+LPQGRREGFI+RII+LYGKA M KHA+
Sbjct: 95  HQKTLPQGRREGFIIRIIMLYGKAEMIKHAL 125


>ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|222840687|gb|EEE78234.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  158 bits (399), Expect = 5e-37
 Identities = 78/89 (87%), Positives = 83/89 (93%)
 Frame = +1

Query: 58  KRPALVKLKKERDPEKLFHLFKANAQNRLVVENRFAFEDTVSRLAGARRFDYIEHLLEQQ 237
           + PALVKLK ERDPEKLF+LFKANA+NRLVVENRFAFEDTVSRLAGA RFDYIEHLLE Q
Sbjct: 39  EEPALVKLKAERDPEKLFNLFKANAENRLVVENRFAFEDTVSRLAGANRFDYIEHLLEHQ 98

Query: 238 KSLPQGRREGFIVRIILLYGKAGMTKHAI 324
           K LPQGRREGF+VRII+LYGKAGM KHAI
Sbjct: 99  KPLPQGRREGFMVRIIMLYGKAGMIKHAI 127


>dbj|BAJ53230.1| JHL06P13.10 [Jatropha curcas]
          Length = 399

 Score =  154 bits (389), Expect = 7e-36
 Identities = 75/89 (84%), Positives = 83/89 (93%)
 Frame = +1

Query: 58  KRPALVKLKKERDPEKLFHLFKANAQNRLVVENRFAFEDTVSRLAGARRFDYIEHLLEQQ 237
           + PAL+KLK ERDPEKLF+LFKANAQNRLV+ENRFAFEDTVSRLAGARRF YIE+LLE Q
Sbjct: 37  EEPALIKLKAERDPEKLFNLFKANAQNRLVIENRFAFEDTVSRLAGARRFHYIENLLEHQ 96

Query: 238 KSLPQGRREGFIVRIILLYGKAGMTKHAI 324
           K+LPQGRREGFIVRII+LY KAGM KHA+
Sbjct: 97  KTLPQGRREGFIVRIIMLYAKAGMVKHAL 125


>ref|XP_002298105.1| predicted protein [Populus trichocarpa] gi|222845363|gb|EEE82910.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  154 bits (388), Expect = 9e-36
 Identities = 74/89 (83%), Positives = 84/89 (94%)
 Frame = +1

Query: 58  KRPALVKLKKERDPEKLFHLFKANAQNRLVVENRFAFEDTVSRLAGARRFDYIEHLLEQQ 237
           + PAL+KLK ERDPEKLF+LFKANA+N+LVVENRFAFEDTVSRLAGA RFDYIEHLLE Q
Sbjct: 39  EEPALLKLKAERDPEKLFNLFKANAENKLVVENRFAFEDTVSRLAGANRFDYIEHLLEHQ 98

Query: 238 KSLPQGRREGFIVRIILLYGKAGMTKHAI 324
           K+LPQGRREG++VRII+LYGKAGM +HAI
Sbjct: 99  KTLPQGRREGYMVRIIMLYGKAGMIEHAI 127


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