BLASTX nr result

ID: Cimicifuga21_contig00028506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028506
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20806.3| unnamed protein product [Vitis vinifera]              164   9e-39
ref|NP_567869.1| putative nucleoredoxin 3 [Arabidopsis thaliana]...   154   9e-36
ref|XP_002867308.1| predicted protein [Arabidopsis lyrata subsp....   151   6e-35
ref|XP_002330779.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|XP_003603563.1| Nucleoredoxin [Medicago truncatula] gi|35549...   143   2e-32

>emb|CBI20806.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  164 bits (414), Expect = 9e-39
 Identities = 75/108 (69%), Positives = 91/108 (84%)
 Frame = +3

Query: 3   GSLEDILVYGQRDYVIAANGEKILVSELIGKTIGLFFGAHWCPPCRGFTTQLAEAYNELK 182
           G LE++L    R++VI+++G +ILVSEL+GKTIGL+F AHWCPPCR FT QL EAYN+L 
Sbjct: 173 GKLEELLANEGRNHVISSSGREILVSELVGKTIGLYFAAHWCPPCRAFTAQLIEAYNKLV 232

Query: 183 ITQNRSFEIIFVSTDRDQEEFDLNISTMPWLAIPYHDKARQDLSRIFD 326
            T+N+ FEIIFVSTDRD +EFDL++S MPWLAIPY DKARQDL RIFD
Sbjct: 233 ATRNQCFEIIFVSTDRDHQEFDLSLSNMPWLAIPYEDKARQDLCRIFD 280



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/92 (44%), Positives = 58/92 (63%)
 Frame = +3

Query: 39  DYVIAANGEKILVSELIGKTIGLFFGAHWCPPCRGFTTQLAEAYNELKITQNRSFEIIFV 218
           +++++  G K+ +S   GK I LFF A+WC PCR FT QL + YN L I   R  EIIF+
Sbjct: 26  EFLLSGEG-KVSLSSTEGKMICLFFSANWCRPCRTFTPQLVQIYNSL-IKTGRMIEIIFI 83

Query: 219 STDRDQEEFDLNISTMPWLAIPYHDKARQDLS 314
           S DRD+  F  +  +MPWLA+P++    + LS
Sbjct: 84  SFDRDETGFGEHFKSMPWLAVPFNVDLHRRLS 115


>ref|NP_567869.1| putative nucleoredoxin 3 [Arabidopsis thaliana]
           gi|42573109|ref|NP_974651.1| putative nucleoredoxin 3
           [Arabidopsis thaliana]
           gi|75161682|sp|Q8VZQ0.1|NRX3_ARATH RecName:
           Full=Probable nucleoredoxin 3; Short=AtNrx3
           gi|17380978|gb|AAL36301.1| unknown protein [Arabidopsis
           thaliana] gi|20465609|gb|AAM20287.1| putative receptor
           kinase [Arabidopsis thaliana]
           gi|332660480|gb|AEE85880.1| putative nucleoredoxin 3
           [Arabidopsis thaliana] gi|332660481|gb|AEE85881.1|
           putative nucleoredoxin 3 [Arabidopsis thaliana]
          Length = 392

 Score =  154 bits (388), Expect = 9e-36
 Identities = 67/108 (62%), Positives = 85/108 (78%)
 Frame = +3

Query: 3   GSLEDILVYGQRDYVIAANGEKILVSELIGKTIGLFFGAHWCPPCRGFTTQLAEAYNELK 182
           G LE +L +  R+YV+A NG K+LVS+L+GKTIGL+FGAHWCPP R FT+QL + YNEL 
Sbjct: 174 GQLEKLLTHESRNYVVARNGSKVLVSKLVGKTIGLYFGAHWCPPFRSFTSQLVDVYNELA 233

Query: 183 ITQNRSFEIIFVSTDRDQEEFDLNISTMPWLAIPYHDKARQDLSRIFD 326
            T   SFE+I +STDRD  EF++N++ MPWLAIPY D+ RQDL RIF+
Sbjct: 234 TTDKGSFEVILISTDRDSREFNINMTNMPWLAIPYEDRTRQDLCRIFN 281



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/96 (39%), Positives = 56/96 (58%)
 Frame = +3

Query: 3   GSLEDILVYGQRDYVIAANGEKILVSELIGKTIGLFFGAHWCPPCRGFTTQLAEAYNELK 182
           G L  IL     +++++ +GE + +  + GKTI LFF A WC PC+ FT +L + Y  L+
Sbjct: 15  GDLYSILAAEGIEFLLSHSGE-VPLEYIHGKTICLFFSAIWCRPCKDFTPELIKLYENLQ 73

Query: 183 ITQNRSFEIIFVSTDRDQEEFDLNISTMPWLAIPYH 290
             +    EIIFVS D D   F  +   MPWLA+P++
Sbjct: 74  -NRGEELEIIFVSFDHDMTSFYEHFWCMPWLAVPFN 108


>ref|XP_002867308.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313144|gb|EFH43567.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 392

 Score =  151 bits (381), Expect = 6e-35
 Identities = 67/107 (62%), Positives = 83/107 (77%)
 Frame = +3

Query: 3   GSLEDILVYGQRDYVIAANGEKILVSELIGKTIGLFFGAHWCPPCRGFTTQLAEAYNELK 182
           G LE +L +  R+YV+A NG K+LVS+L+GKTIGL+FGAHWCPP R FT+QL + YNEL 
Sbjct: 174 GQLEKLLTHESRNYVVARNGSKVLVSKLVGKTIGLYFGAHWCPPFRSFTSQLLDVYNELA 233

Query: 183 ITQNRSFEIIFVSTDRDQEEFDLNISTMPWLAIPYHDKARQDLSRIF 323
                SFE+I VSTDRD  EF++N++ MPWLAIPY D+ RQDL RIF
Sbjct: 234 TRDKGSFEVILVSTDRDSREFNINMTNMPWLAIPYEDRTRQDLCRIF 280



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/96 (40%), Positives = 58/96 (60%)
 Frame = +3

Query: 3   GSLEDILVYGQRDYVIAANGEKILVSELIGKTIGLFFGAHWCPPCRGFTTQLAEAYNELK 182
           G L  IL     +++++ +GE + +  + GKTI LFF A+WC PC+ FT +L + Y  L+
Sbjct: 15  GDLYSILAAEGIEFLLSHSGE-VPLEYIHGKTICLFFSANWCRPCKDFTPELVKLYENLQ 73

Query: 183 ITQNRSFEIIFVSTDRDQEEFDLNISTMPWLAIPYH 290
            T+    EIIFVS D D   F  +   MPWLA+P++
Sbjct: 74  -TRGEELEIIFVSFDHDMTLFYEHFWCMPWLAVPFN 108


>ref|XP_002330779.1| predicted protein [Populus trichocarpa] gi|222872581|gb|EEF09712.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  145 bits (365), Expect = 4e-33
 Identities = 66/108 (61%), Positives = 83/108 (76%)
 Frame = +3

Query: 3   GSLEDILVYGQRDYVIAANGEKILVSELIGKTIGLFFGAHWCPPCRGFTTQLAEAYNELK 182
           G L+ +L +  R+YV++ +  KI VSEL+GKTIGL+FGAHWCPP R FTTQL + YNE+ 
Sbjct: 173 GKLQQLLAHEGRNYVLSGDTRKIFVSELVGKTIGLYFGAHWCPPSRAFTTQLIQNYNEII 232

Query: 183 ITQNRSFEIIFVSTDRDQEEFDLNISTMPWLAIPYHDKARQDLSRIFD 326
            T +  FEII VSTDRD +EF+ N+S MPWLAIPY D+ RQDL RIF+
Sbjct: 233 TTNDGCFEIILVSTDRDLKEFNTNLSNMPWLAIPYEDRTRQDLCRIFN 280



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/95 (41%), Positives = 58/95 (61%)
 Frame = +3

Query: 39  DYVIAANGEKILVSELIGKTIGLFFGAHWCPPCRGFTTQLAEAYNELKITQNRSFEIIFV 218
           DY+++  G K+ +S    K I LFF A+WC PC+ F  QL + YN L+ T  +  EI+F+
Sbjct: 26  DYLLSGEG-KVPLSSCDCKVICLFFSANWCRPCKAFAPQLVKIYNSLRGT-GKKLEIVFI 83

Query: 219 STDRDQEEFDLNISTMPWLAIPYHDKARQDLSRIF 323
           S DRD++ F  +   MPWLA+P+     + LS I+
Sbjct: 84  SFDRDEDGFKEHFKCMPWLAVPFEVNLHRHLSDIY 118


>ref|XP_003603563.1| Nucleoredoxin [Medicago truncatula] gi|355492611|gb|AES73814.1|
           Nucleoredoxin [Medicago truncatula]
           gi|388520387|gb|AFK48255.1| unknown [Medicago
           truncatula]
          Length = 392

 Score =  143 bits (360), Expect = 2e-32
 Identities = 63/107 (58%), Positives = 85/107 (79%)
 Frame = +3

Query: 6   SLEDILVYGQRDYVIAANGEKILVSELIGKTIGLFFGAHWCPPCRGFTTQLAEAYNELKI 185
           +L+++L +G R+++I+ +  K+LVSEL GKT+GLFFGA+W PPC  FT QLA+AYN LK 
Sbjct: 174 NLDELLTHGGRNFLISGDDRKVLVSELTGKTVGLFFGAYWSPPCHAFTIQLADAYNNLKD 233

Query: 186 TQNRSFEIIFVSTDRDQEEFDLNISTMPWLAIPYHDKARQDLSRIFD 326
           T+   FEI+ VSTDRD +EF++N ++MPWLAIPY D+ R DL RIFD
Sbjct: 234 TKGHCFEIVLVSTDRDLKEFNVNRTSMPWLAIPYEDRTRHDLCRIFD 280



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/82 (42%), Positives = 50/82 (60%)
 Frame = +3

Query: 66  KILVSELIGKTIGLFFGAHWCPPCRGFTTQLAEAYNELKITQNRSFEIIFVSTDRDQEEF 245
           K+ +S+  GK I LFF A+WC PCR F   L   Y  L+  +  + EIIF+S D D++ F
Sbjct: 34  KVPLSDCNGKIICLFFSANWCRPCRLFIPHLVGLYETLR-KRGINIEIIFISFDHDEDGF 92

Query: 246 DLNISTMPWLAIPYHDKARQDL 311
             +I +MPWLA+P+  K  + L
Sbjct: 93  KEHIKSMPWLAVPFDAKLNRRL 114


Top