BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028494
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containi...    92   4e-17
ref|XP_002325952.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002525536.1| pentatricopeptide repeat-containing protein,...    73   3e-11
ref|XP_004141361.1| PREDICTED: pentatricopeptide repeat-containi...    68   9e-10
ref|XP_003637044.1| Pentatricopeptide repeat-containing protein ...    59   5e-07

>ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Vitis vinifera]
          Length = 582

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/92 (47%), Positives = 62/92 (67%)
 Frame = +2

Query: 59  ERSQEIVEVIKRDEKDMENELNKMGLALSLDLISEVFAGLNADRVSGLRFFKWVREKQVH 238
           +R  EI++VI+ DE DME +LN M L LS+  ++E+F  LN +R+S +RFF+W+   +  
Sbjct: 204 KRISEIIKVIRSDEIDMEVKLNLMNLRLSVASVTEIFRVLNLERLSAMRFFEWISHSRSG 263

Query: 239 FCRNSDFCSLAIDNLGRIEDYNSMLLTLKDFS 334
             RN D CSL IDN GR+ DY +M   LKDF+
Sbjct: 264 LSRNYDICSLIIDNCGRLGDYETMRCLLKDFN 295


>ref|XP_002325952.1| predicted protein [Populus trichocarpa] gi|222862827|gb|EEF00334.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/93 (44%), Positives = 64/93 (68%)
 Frame = +2

Query: 56  QERSQEIVEVIKRDEKDMENELNKMGLALSLDLISEVFAGLNADRVSGLRFFKWVREKQV 235
           Q++   I+++IKRDE D+E +L  + + LS+  ++ VF  LN+++VS LRFF+W+R  Q 
Sbjct: 59  QKQVAYIIDLIKRDEYDLEYKLGSLSVKLSIASVTLVFHVLNSEKVSALRFFRWIRHWQP 118

Query: 236 HFCRNSDFCSLAIDNLGRIEDYNSMLLTLKDFS 334
               NSD CSL IDN GR++DY++M   L +F+
Sbjct: 119 ELRCNSDICSLVIDNCGRLDDYDAMRSLLNEFN 151


>ref|XP_002525536.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535215|gb|EEF36894.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 430

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/87 (39%), Positives = 53/87 (60%)
 Frame = +2

Query: 74  IVEVIKRDEKDMENELNKMGLALSLDLISEVFAGLNADRVSGLRFFKWVREKQVHFCRNS 253
           I+ ++  ++ ++E +LN +G+ LS+  +  VF  LN ++ S L+FF W+R  Q     NS
Sbjct: 64  IIGLLITEDNELETKLNSLGVRLSIGSVRWVFQVLNREKKSALQFFHWIRRWQPELEGNS 123

Query: 254 DFCSLAIDNLGRIEDYNSMLLTLKDFS 334
           D CSL IDN G ++DY +M   L  FS
Sbjct: 124 DICSLVIDNCGHLDDYKAMRCLLDGFS 150


>ref|XP_004141361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
           gi|449498723|ref|XP_004160616.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 494

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/110 (32%), Positives = 61/110 (55%)
 Frame = +2

Query: 2   KSQISREKSDFSKSGSRNQERSQEIVEVIKRDEKDMENELNKMGLALSLDLISEVFAGLN 181
           K Q      + SK    + + S  I+ +I+ +++D+E++L+   + L+  L+ ++   LN
Sbjct: 99  KRQCGTGNLNVSKRNVTSNQLSN-IINIIRENQEDLESKLDSPNVRLTNVLVGQILEMLN 157

Query: 182 ADRVSGLRFFKWVREKQVHFCRNSDFCSLAIDNLGRIEDYNSMLLTLKDF 331
             ++S  RFF WV  +   F  NSD  SL IDN GR++DY  +L  L +F
Sbjct: 158 KHKISASRFFNWVSVQSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEF 207


>ref|XP_003637044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|358346621|ref|XP_003637365.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355502979|gb|AES84182.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355503300|gb|AES84503.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 448

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/100 (31%), Positives = 56/100 (56%)
 Frame = +2

Query: 35  SKSGSRNQERSQEIVEVIKRDEKDMENELNKMGLALSLDLISEVFAGLNADRVSGLRFFK 214
           +K  + +++ SQ I  VI+ D   +E+ LN M ++LS+  +  +F  L + RVS L FF 
Sbjct: 70  NKPYATSKQVSQIIAMVIEGDN-GLEHRLNMMNVSLSMASVIYIFDALASQRVSALMFFH 128

Query: 215 WVREKQVHFCRNSDFCSLAIDNLGRIEDYNSMLLTLKDFS 334
           W+       C + +     +DN G + D+++M+  L+DF+
Sbjct: 129 WLNVSHPELCCDPEIGCCVVDNCGLLRDFDAMVPILRDFN 168