BLASTX nr result

ID: Cimicifuga21_contig00028469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028469
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19580.3| unnamed protein product [Vitis vinifera]               86   4e-15
emb|CAN72175.1| hypothetical protein VITISV_012535 [Vitis vinifera]    86   4e-15
ref|XP_003545297.1| PREDICTED: protein OSB1, mitochondrial-like ...    74   1e-11
ref|XP_003589249.1| Protein OSB1 [Medicago truncatula] gi|355478...    72   6e-11
ref|XP_003545299.1| PREDICTED: protein OSB1, mitochondrial-like ...    70   1e-10

>emb|CBI19580.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 58/122 (47%), Positives = 73/122 (59%), Gaps = 8/122 (6%)
 Frame = -3

Query: 343 LHRLVRFSSS--LTPKAR-----DSECAGSLVYRHKLQFQRPTTISPKYWLEYRPINSVS 185
           L +L+ FSSS    P AR     D    GS +YRH L+FQRPTTI    W + R  NSVS
Sbjct: 18  LQKLLHFSSSSAANPSARRFVSDDLSADGSSIYRHTLKFQRPTTIK---WCD-RFHNSVS 73

Query: 184 FIGSVVMPV-RPTRSSARFGVHTFLQVESSRGSKDSFRILLVMWEKMAEISSKYLKQNDF 8
           FIGSV  P+ R    +    V+T L V+  R ++   RI L MW++MAEIS K+LKQND 
Sbjct: 74  FIGSVDRPLERRYTINGDLYVYTVLHVKPFREARRDVRIFLQMWDRMAEISFKHLKQNDL 133

Query: 7   IY 2
           I+
Sbjct: 134 IH 135


>emb|CAN72175.1| hypothetical protein VITISV_012535 [Vitis vinifera]
          Length = 273

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 58/122 (47%), Positives = 72/122 (59%), Gaps = 8/122 (6%)
 Frame = -3

Query: 343 LHRLVRFSSS--LTPKAR-----DSECAGSLVYRHKLQFQRPTTISPKYWLEYRPINSVS 185
           L +L+ FSSS    P AR     D    GS +YRH L+FQRPTTI    W + R  NSVS
Sbjct: 18  LQKLLHFSSSSAANPSARRFVSDDLSADGSSIYRHTLKFQRPTTIK---WCD-RFHNSVS 73

Query: 184 FIGSVVMPV-RPTRSSARFGVHTFLQVESSRGSKDSFRILLVMWEKMAEISSKYLKQNDF 8
           FIGSV  P+ R         V+T L V+  R ++   RI L MW++MAEIS K+LKQND 
Sbjct: 74  FIGSVDRPLERRYTIXGDLXVYTXLHVKPFREARRDVRIFLQMWDRMAEISFKHLKQNDL 133

Query: 7   IY 2
           I+
Sbjct: 134 IH 135


>ref|XP_003545297.1| PREDICTED: protein OSB1, mitochondrial-like [Glycine max]
          Length = 270

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 50/128 (39%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
 Frame = -3

Query: 379 PFSLLNKFLTSPLHRLVRFSSSLTPKARDSECAGSLVYRHKLQFQRPTTISPKYWLEYRP 200
           P  LL  F  SP  +   FS+       ++    S VY+H L+FQRP TI     LE   
Sbjct: 13  PIPLLFSFPFSPQQQRFLFSTHNRHSFDEAVPGCSAVYQHVLKFQRPPTIRWSPHLE--- 69

Query: 199 INSVSFIGSVVM-PVRPTRSSARFGVHTFLQVESSRGSKDSF-RILLVMWEKMAEISSKY 26
            N+ SFIG+V   P R   ++ +FGV+T L+V  S  S  SF R+LL+M   +A+++S++
Sbjct: 70  -NTASFIGTVAREPTRVNSTTGKFGVYTVLKVPKSNQSNSSFFRLLLMMRNNVAKLASEH 128

Query: 25  LKQNDFIY 2
           LK ND I+
Sbjct: 129 LKSNDLIH 136


>ref|XP_003589249.1| Protein OSB1 [Medicago truncatula] gi|355478297|gb|AES59500.1|
           Protein OSB1 [Medicago truncatula]
          Length = 268

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 53/132 (40%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
 Frame = -3

Query: 373 SLLNKFLTSP--LHRLVRFSSSLTPKARDSEC------AGSLVYRHKLQFQRPTTISPKY 218
           SL  K + +P  LH+   FS++  P    S          S VY H L+FQRP TI  K 
Sbjct: 10  SLFAKPIQTPSILHKCFSFSTTNHPTKSSSHYFDDVVPGTSSVYNHALKFQRPATIRWKP 69

Query: 217 WLEYRPINSVSFIGSVVMPVRPTRSS-ARFGVHTFLQVESSRGSKDSFRILLVMWEKMAE 41
            LE    NS SFIGSV   V+   S    FGV+T L+V+  +  +  F +LL+MW  +AE
Sbjct: 70  RLE----NSASFIGSVAREVKHVNSKFGDFGVYTTLRVQ--KPDRSPFWVLLMMWNNVAE 123

Query: 40  ISSKYLKQNDFI 5
           I+ ++LK ND I
Sbjct: 124 IAYEHLKPNDLI 135


>ref|XP_003545299.1| PREDICTED: protein OSB1, mitochondrial-like [Glycine max]
          Length = 271

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
 Frame = -3

Query: 379 PFSLLNKFLTSPLHRLVRFSSSLTPKARDSECAGSLVYRHKLQFQRPTTISPKYWLEYRP 200
           P  LL  +  SP  +   FS+       ++    S VY+H L+FQRP TI     LE   
Sbjct: 13  PIPLLFSYPFSPQQQRFPFSTHNRHSFDEAVPGCSAVYQHVLKFQRPPTIRWSPHLE--- 69

Query: 199 INSVSFIGSVVM-PVRPTRSSARFGVHTFLQVESSRGSKDSF-RILLVMWEKMAEISSKY 26
            N+ SFIG+V   P R   ++ + GV+T L+V  S  S  SF R+LL+M   +A+++S++
Sbjct: 70  -NTASFIGTVAREPTRVNSTTGKCGVYTVLKVPKSNQSNSSFFRLLLMMRNNVAKLASEH 128

Query: 25  LKQNDFI 5
           LK NDFI
Sbjct: 129 LKLNDFI 135


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