BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028434
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509934.1| transcription factor, putative [Ricinus comm...    87   2e-15
ref|XP_004162361.1| PREDICTED: LOW QUALITY PROTEIN: high mobilit...    81   1e-13
ref|XP_004149754.1| PREDICTED: high mobility group B protein 13-...    81   1e-13
ref|NP_001190816.1| HMG (high mobility group) box protein [Arabi...    78   9e-13
ref|NP_194111.1| HMG (high mobility group) box protein [Arabidop...    78   9e-13

>ref|XP_002509934.1| transcription factor, putative [Ricinus communis]
           gi|223549833|gb|EEF51321.1| transcription factor,
           putative [Ricinus communis]
          Length = 514

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/81 (51%), Positives = 50/81 (61%)
 Frame = +3

Query: 129 FRPTVSFPLVQTLRXXXXXXXXXXXXXXXXXXXXXXXXXXYILWCKDQWNEVKKENPNAE 308
           F+P ++FPL+Q+                            YILWCKDQWNEVK ENPNAE
Sbjct: 166 FKPNMNFPLLQSFNEEQDKKKKKKKGGHEKKRPSPP----YILWCKDQWNEVKNENPNAE 221

Query: 309 FKEISNILGSKWKNLNDEDKK 371
           FKEISNILG+KWKN++ EDKK
Sbjct: 222 FKEISNILGAKWKNVSTEDKK 242


>ref|XP_004162361.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
           13-like [Cucumis sativus]
          Length = 500

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/81 (45%), Positives = 49/81 (60%)
 Frame = +3

Query: 129 FRPTVSFPLVQTLRXXXXXXXXXXXXXXXXXXXXXXXXXXYILWCKDQWNEVKKENPNAE 308
           F+PT++FP++Q  +                          YILWCKDQWNE+KKENP A+
Sbjct: 144 FKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPP-----YILWCKDQWNEIKKENPEAD 198

Query: 309 FKEISNILGSKWKNLNDEDKK 371
           FKE SNILG+KWK ++ E+KK
Sbjct: 199 FKETSNILGAKWKTISAEEKK 219


>ref|XP_004149754.1| PREDICTED: high mobility group B protein 13-like [Cucumis sativus]
          Length = 500

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/81 (45%), Positives = 49/81 (60%)
 Frame = +3

Query: 129 FRPTVSFPLVQTLRXXXXXXXXXXXXXXXXXXXXXXXXXXYILWCKDQWNEVKKENPNAE 308
           F+PT++FP++Q  +                          YILWCKDQWNE+KKENP A+
Sbjct: 144 FKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPP-----YILWCKDQWNEIKKENPEAD 198

Query: 309 FKEISNILGSKWKNLNDEDKK 371
           FKE SNILG+KWK ++ E+KK
Sbjct: 199 FKETSNILGAKWKTISAEEKK 219


>ref|NP_001190816.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
           gi|332659408|gb|AEE84808.1| HMG (high mobility group)
           box protein [Arabidopsis thaliana]
          Length = 450

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = +3

Query: 249 YILWCKDQWNEVKKENPNAEFKEISNILGSKWKNLNDEDKK 371
           Y+LWCKDQW EVKKENP A+FKE SNILG+KWK+L+ EDKK
Sbjct: 145 YVLWCKDQWTEVKKENPEADFKETSNILGAKWKSLSAEDKK 185


>ref|NP_194111.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
           gi|75266376|sp|Q9SUP7.1|HMGB6_ARATH RecName: Full=High
           mobility group B protein 6; AltName:
           Full=Nucleosome/chromatin assembly factor group D 06;
           Short=Nucleosome/chromatin assembly factor group D 6;
           AltName: Full=WRKY transcription factor 53;
           Short=AtWRKY53; Short=WRKY DNA-binding protein 53
           gi|4454049|emb|CAA23046.1| 98b like protein [Arabidopsis
           thaliana] gi|7269229|emb|CAB81298.1| 98b like protein
           [Arabidopsis thaliana] gi|18377799|gb|AAL67049.1|
           putative 98b protein [Arabidopsis thaliana]
           gi|20465867|gb|AAM20038.1| putative 98b protein
           [Arabidopsis thaliana] gi|22022506|gb|AAM83212.1|
           putative 98b protein [Arabidopsis thaliana]
           gi|332659407|gb|AEE84807.1| HMG (high mobility group)
           box protein [Arabidopsis thaliana]
          Length = 456

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = +3

Query: 249 YILWCKDQWNEVKKENPNAEFKEISNILGSKWKNLNDEDKK 371
           Y+LWCKDQW EVKKENP A+FKE SNILG+KWK+L+ EDKK
Sbjct: 145 YVLWCKDQWTEVKKENPEADFKETSNILGAKWKSLSAEDKK 185