BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028416
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    70   2e-10
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    66   3e-09
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...    60   1e-07
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    60   1e-07

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
 Frame = +3

Query: 3   LVMAIYSSIDKLAMTRPSDTTWKPLECPNCAHDDILFFRGQFYAVGSLGQLRICDLTSSH 182
           +V+AI +  D LA  R  D +W  +E      +D++F  G FYAV   GQ+ ICD++S  
Sbjct: 181 VVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICDISSDS 240

Query: 183 PVAREFVSPPRDMDGWARMYLVEMSGELHIVVRSFEYNGENFLFGGHPN-------RTIS 341
           P    F+  PR   G    YLV    EL +V R  +   E      HP+       RTI 
Sbjct: 241 PRV-SFMETPRQAGG-DMQYLVNSGDELLLVTRYLDLEYE----FDHPDMEPHLIYRTIR 294

Query: 342 FQVYRLDFS 368
           F+V+RLD++
Sbjct: 295 FEVFRLDWN 303


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
 Frame = +3

Query: 6    VMAIYSSIDKLAMTRPSDTTWKPLECPNCAHDDILFFRGQFYAVGSLGQLRICDLTSSHP 185
            VM IYS   +LA T+P   TW  LE  +   DDI++F G F AV    ++ ICD++ S  
Sbjct: 1079 VMIIYSDYGRLAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQL 1138

Query: 186  VAREFVSPP--RDMD--GWARMYLVEMSGELHIVVRSFEYNGENFLFGGHPNRTISFQVY 353
                F + P  +D+D   +   YLVE  GE+++V R+        +      RT +F V 
Sbjct: 1139 KTIRFAAAPALQDVDEIEYEAKYLVESGGEIYMVTRNLYDTARRDI---PYMRTWTFSVL 1195

Query: 354  RLDFSTR 374
            +LD   +
Sbjct: 1196 KLDMCNK 1202


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/122 (31%), Positives = 60/122 (49%)
 Frame = +3

Query: 3   LVMAIYSSIDKLAMTRPSDTTWKPLECPNCAHDDILFFRGQFYAVGSLGQLRICDLTSSH 182
           + MAI  S   LA  +  D  W  +E      +D+++F G FYAV   GQ+ +CD+  + 
Sbjct: 182 VAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNGNS 241

Query: 183 PVAREFVSPPRDMDGWARMYLVEMSGELHIVVRSFEYNGENFLFGGHPNRTISFQVYRLD 362
           P    F+  PR + G    YLV     L +V R  + + E  +F     +T  F+V++LD
Sbjct: 242 PKV-SFIETPRQIGG-DMQYLVSSGDGLLLVTRYLDLDVEFDIF---IYKTARFEVFKLD 296

Query: 363 FS 368
            +
Sbjct: 297 LN 298


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
           gi|223551309|gb|EEF52795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
 Frame = +3

Query: 6   VMAIYSSI---DKLAMTRPSDTTWKPLE--CPNCAHDDILFFRGQFYAVGSLGQLRICDL 170
           VMAIY +I   + +A  +  D TW  ++       + D++F RG+FYAV   G++ IC  
Sbjct: 172 VMAIYKTINSTENIAFCKSGDATWFTIQETSQKIHYQDVMFHRGKFYAVDDKGRVSICIT 231

Query: 171 TSSHPVAREFVSPP--RDMDGWARMYLVEMSGELHIVVRSFEYNGENFLFGGHPNRTISF 344
             + P   +   PP    + G+ + YL  +  +L +  R  +Y G      G+  +T  F
Sbjct: 232 DINPPSVIQVADPPPVPPLMGYKQWYLASLDEDLILAGRFRKYRG-----SGYEYQTHKF 286

Query: 345 QVYRLDFST 371
            VY+LD S+
Sbjct: 287 MVYKLDASS 295


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
 Frame = +3

Query: 3   LVMAIYSSIDKLAMTRPSDTTWKPLECPNCAHDDILFFRGQFYAVGSLGQLRICDLTSSH 182
           + + I +    LA+ R SD +W  LE      +D++F RG FYAV   G + +CD++ S 
Sbjct: 178 IAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSS 237

Query: 183 PVAREFVSPPRDMDGWARMYLVEMSGELHIVVR------SFEYNGENFLFGGHPNRTISF 344
           P     +  P+   G    YLVE   EL +V R        E +  + ++     RT  F
Sbjct: 238 PRV-SIIEMPQQFGG-DLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIY-----RTTRF 290

Query: 345 QVYRLD 362
           QV RLD
Sbjct: 291 QVCRLD 296