BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028415
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|2...   244   7e-63
ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [...   241   4e-62
ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i...   239   2e-61
emb|CBI15710.3| unnamed protein product [Vitis vinifera]              238   4e-61
ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [...   233   2e-59

>ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|222868725|gb|EEF05856.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  244 bits (622), Expect = 7e-63
 Identities = 110/125 (88%), Positives = 121/125 (96%)
 Frame = +1

Query: 13  MDIVWQTPANPPERHDYIFRNGRRHVRPYYFEFISHVKNRWAGKNIVDLFADEFKGRPYD 192
           M+IVWQTPANPPE+HDYIFR+GRRHVRPY+FEFISHVKNRWAGK IVDLFA+EFKGRPYD
Sbjct: 16  MEIVWQTPANPPEKHDYIFRDGRRHVRPYHFEFISHVKNRWAGKTIVDLFAEEFKGRPYD 75

Query: 193 YYVSAVECGRIQVDGQMVPVSYIVKSSQKISHFLHRHEPPVMAWDISILHKEDDVVTICK 372
           YYVSAV+CGRIQVDG+MVPVSYIVKSSQKISHF+HRHEPPVMAWD+ IL KEDDVVT+ K
Sbjct: 76  YYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFVHRHEPPVMAWDVPILDKEDDVVTVWK 135

Query: 373 PASVP 387
           PA+VP
Sbjct: 136 PATVP 140


>ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223550244|gb|EEF51731.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 385

 Score =  241 bits (615), Expect = 4e-62
 Identities = 108/128 (84%), Positives = 120/128 (93%)
 Frame = +1

Query: 4   RGDMDIVWQTPANPPERHDYIFRNGRRHVRPYYFEFISHVKNRWAGKNIVDLFADEFKGR 183
           + DM+IVWQTPANPPE+HDYIFR+GRRHVRPYYFEFISH KNRWAGK IVDLFA+EFKGR
Sbjct: 10  KNDMEIVWQTPANPPEKHDYIFRDGRRHVRPYYFEFISHAKNRWAGKTIVDLFAEEFKGR 69

Query: 184 PYDYYVSAVECGRIQVDGQMVPVSYIVKSSQKISHFLHRHEPPVMAWDISILHKEDDVVT 363
           PYDYYVSAV+CGRIQVDG+ VPVSYIVKSSQKISHFLHRHEPPV AWDI +L+K+ DVVT
Sbjct: 70  PYDYYVSAVKCGRIQVDGETVPVSYIVKSSQKISHFLHRHEPPVTAWDIPVLYKDPDVVT 129

Query: 364 ICKPASVP 387
           + KPA+VP
Sbjct: 130 VYKPATVP 137


>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis
           vinifera] gi|359491114|ref|XP_002280549.2| PREDICTED:
           RNA pseudourine synthase 7-like isoform 1 [Vitis
           vinifera]
          Length = 386

 Score =  239 bits (609), Expect = 2e-61
 Identities = 107/126 (84%), Positives = 120/126 (95%)
 Frame = +1

Query: 10  DMDIVWQTPANPPERHDYIFRNGRRHVRPYYFEFISHVKNRWAGKNIVDLFADEFKGRPY 189
           +M+IVWQTPANPPERHDYIFRNG+RHVRPYYFEFISHVKNRWAGK IVDLF +EFKGRPY
Sbjct: 10  EMEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPY 69

Query: 190 DYYVSAVECGRIQVDGQMVPVSYIVKSSQKISHFLHRHEPPVMAWDISILHKEDDVVTIC 369
           DYYV+AV+ GRIQVDG+MVPVSYIV+SSQKISHF+HRHEPPV+A D+S+L KE DV+TIC
Sbjct: 70  DYYVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDVLTIC 129

Query: 370 KPASVP 387
           KPASVP
Sbjct: 130 KPASVP 135


>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  238 bits (607), Expect = 4e-61
 Identities = 107/125 (85%), Positives = 119/125 (95%)
 Frame = +1

Query: 13  MDIVWQTPANPPERHDYIFRNGRRHVRPYYFEFISHVKNRWAGKNIVDLFADEFKGRPYD 192
           M+IVWQTPANPPERHDYIFRNG+RHVRPYYFEFISHVKNRWAGK IVDLF +EFKGRPYD
Sbjct: 1   MEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYD 60

Query: 193 YYVSAVECGRIQVDGQMVPVSYIVKSSQKISHFLHRHEPPVMAWDISILHKEDDVVTICK 372
           YYV+AV+ GRIQVDG+MVPVSYIV+SSQKISHF+HRHEPPV+A D+S+L KE DV+TICK
Sbjct: 61  YYVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDVLTICK 120

Query: 373 PASVP 387
           PASVP
Sbjct: 121 PASVP 125


>ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [Cucumis sativus]
           gi|449501468|ref|XP_004161375.1| PREDICTED: RNA
           pseudourine synthase 7-like [Cucumis sativus]
          Length = 393

 Score =  233 bits (593), Expect = 2e-59
 Identities = 103/123 (83%), Positives = 115/123 (93%)
 Frame = +1

Query: 19  IVWQTPANPPERHDYIFRNGRRHVRPYYFEFISHVKNRWAGKNIVDLFADEFKGRPYDYY 198
           IVWQTP NPP+R DYIF NGRRHVRPYYFEFI+HVKNRWAGK IVDLFA+EFKGRPY+YY
Sbjct: 21  IVWQTPDNPPQRSDYIFHNGRRHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYY 80

Query: 199 VSAVECGRIQVDGQMVPVSYIVKSSQKISHFLHRHEPPVMAWDISILHKEDDVVTICKPA 378
           V AVECGRIQVDG+MVPVSYIVKSSQKISHFLHRHEPPVMAW + +L +E++V+T+CKPA
Sbjct: 81  VDAVECGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMAWGVKVLKEEEEVLTVCKPA 140

Query: 379 SVP 387
           SVP
Sbjct: 141 SVP 143