BLASTX nr result

ID: Cimicifuga21_contig00028411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028411
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275524.1| PREDICTED: uncharacterized protein LOC100244...   108   3e-22
ref|XP_002516213.1| conserved hypothetical protein [Ricinus comm...   100   2e-19
ref|XP_002326308.1| SAUR family protein [Populus trichocarpa] gi...    99   4e-19
ref|XP_002529171.1| conserved hypothetical protein [Ricinus comm...    95   7e-18
gb|AFK34109.1| unknown [Lotus japonicus]                               94   1e-17

>ref|XP_002275524.1| PREDICTED: uncharacterized protein LOC100244113 [Vitis vinifera]
           gi|297738513|emb|CBI27758.3| unnamed protein product
           [Vitis vinifera]
          Length = 120

 Score =  108 bits (271), Expect = 3e-22
 Identities = 59/106 (55%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
 Frame = -1

Query: 313 MAKGG--KLMKLKSILKKWNSMSRLGXXXXXXXXXXXXXXXXXXXXXXXXSGTLHAVYVG 140
           MAKGG  KL KLKS++KKW S+ +LG                           LH VYVG
Sbjct: 1   MAKGGGGKLTKLKSVIKKWQSIGKLGRANGSSIAAASPSDDDSDSRD------LHPVYVG 54

Query: 139 KSRRRYLIGSDIIEHPLVRELVDRSGGSDAFTVDCEVVLFEHLLWM 2
           KSRRRYL+GSD++EHPL RELV+RSG SD   V CEVVLFEHLLWM
Sbjct: 55  KSRRRYLVGSDVMEHPLFRELVERSGDSDTVNVACEVVLFEHLLWM 100


>ref|XP_002516213.1| conserved hypothetical protein [Ricinus communis]
           gi|223544699|gb|EEF46215.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 123

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 58/106 (54%), Positives = 63/106 (59%), Gaps = 2/106 (1%)
 Frame = -1

Query: 313 MAKGGKLMKLKSILKKWNSMSRLGXXXXXXXXXXXXXXXXXXXXXXXXSGTLHAVYVGKS 134
           MAKGGKL KLKS+LKK NS +                            G LH VYVGKS
Sbjct: 1   MAKGGKLTKLKSVLKKLNSFNS---KQSRPSGSSIAATADDSSTSSYSVGDLHPVYVGKS 57

Query: 133 RRRYLIGSDIIEHPLVRELVDRSGGSDAFTVD--CEVVLFEHLLWM 2
           RRRYLI SDII+HPL REL +RS  SD  T+   CEVVLFEHLLWM
Sbjct: 58  RRRYLISSDIIDHPLFRELAERSSESDDHTISIACEVVLFEHLLWM 103


>ref|XP_002326308.1| SAUR family protein [Populus trichocarpa]
           gi|222833501|gb|EEE71978.1| SAUR family protein [Populus
           trichocarpa]
          Length = 126

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 58/107 (54%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
 Frame = -1

Query: 313 MAKGGKLMKLKSILKKWNSMSRLGXXXXXXXXXXXXXXXXXXXXXXXXSGTLHAVYVGKS 134
           MAKGGKLM+LKS+LKK NS +                           SG LH VYVGKS
Sbjct: 1   MAKGGKLMRLKSVLKKLNSFNN-NKQSRPSKIGSSISVTNDDISSSYSSGDLHPVYVGKS 59

Query: 133 RRRYLIGSDIIEHPLVRELVDRSG---GSDAFTVDCEVVLFEHLLWM 2
           RRRYLI SDII+HPL REL +RS      D   V CEVVLFEHLLWM
Sbjct: 60  RRRYLISSDIIDHPLFRELAERSSTEQSPDTINVACEVVLFEHLLWM 106


>ref|XP_002529171.1| conserved hypothetical protein [Ricinus communis]
           gi|223531349|gb|EEF33185.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 54/107 (50%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
 Frame = -1

Query: 313 MAKGGKLMKLKSILKKWNSMSRLGXXXXXXXXXXXXXXXXXXXXXXXXSGTLHAVYVGKS 134
           MAK GKL KLKS +K+W S+++L                            LHAVYVGKS
Sbjct: 1   MAKIGKLTKLKSAIKRWPSLTKLARTNSTIAATNESEDKILKGIDDDDQ--LHAVYVGKS 58

Query: 133 RRRYLIGSDIIEHPLVRELVDRSGGSD---AFTVDCEVVLFEHLLWM 2
           RRRYL+ SD I HPL +EL++RSGG D      V CEVVLFEHLLWM
Sbjct: 59  RRRYLLSSDTIYHPLFQELIERSGGFDHDGEVVVSCEVVLFEHLLWM 105


>gb|AFK34109.1| unknown [Lotus japonicus]
          Length = 122

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 53/104 (50%), Positives = 62/104 (59%)
 Frame = -1

Query: 313 MAKGGKLMKLKSILKKWNSMSRLGXXXXXXXXXXXXXXXXXXXXXXXXSGTLHAVYVGKS 134
           MAK GKL KLKS +K+W S+++L                            LHAVYVGKS
Sbjct: 1   MAKLGKLTKLKSAIKRWPSLTKLSRSNSCVSSNKEGGAASSKEQEQEQ---LHAVYVGKS 57

Query: 133 RRRYLIGSDIIEHPLVRELVDRSGGSDAFTVDCEVVLFEHLLWM 2
           RRRYL+ SD+I HPL +ELVDRS   +   V CEVVLFEHLLWM
Sbjct: 58  RRRYLVNSDVIRHPLFQELVDRS-CDEEIVVSCEVVLFEHLLWM 100


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