BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028406
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306643.1| predicted protein [Populus trichocarpa] gi|2...   171   4e-41
ref|XP_002283626.1| PREDICTED: ribosomal RNA small subunit methy...   171   6e-41
ref|XP_004136324.1| PREDICTED: ribosomal RNA small subunit methy...   171   7e-41
dbj|BAK07303.1| predicted protein [Hordeum vulgare subsp. vulgare]    168   4e-40
ref|NP_001045831.1| Os02g0137600 [Oryza sativa Japonica Group] g...   167   6e-40

>ref|XP_002306643.1| predicted protein [Populus trichocarpa] gi|222856092|gb|EEE93639.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score =  171 bits (434), Expect = 4e-41
 Identities = 92/139 (66%), Positives = 103/139 (74%), Gaps = 16/139 (11%)
 Frame = +3

Query: 15  KGWVKTATRVFQALRIAVNDELKTLEHALRACFDCLCCGGRLAVISFHSLEDRIVKQTFL 194
           +GW+KTATRVFQALRIAVNDEL TLE +L ACF+CL  GGRLAVISFHSLEDRIVKQTFL
Sbjct: 298 QGWIKTATRVFQALRIAVNDELNTLEKSLHACFECLVPGGRLAVISFHSLEDRIVKQTFL 357

Query: 195 DIINISNGGDGSRILD----------------GDAWVKQRIIGATGTILTKRPITPSEEE 326
            II  SNGGDG  + +                 + W++Q + G  GTILTKRPITPSEEE
Sbjct: 358 KIIE-SNGGDGDVVEEEAGKRDLRKMRNDIDAKETWIRQMVQGQNGTILTKRPITPSEEE 416

Query: 327 ERLNYRCRSAKLRVVEKTR 383
           ERLN R RSAKLRV+EK R
Sbjct: 417 ERLNRRSRSAKLRVIEKIR 435


>ref|XP_002283626.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
           [Vitis vinifera]
          Length = 444

 Score =  171 bits (433), Expect = 6e-41
 Identities = 95/139 (68%), Positives = 104/139 (74%), Gaps = 18/139 (12%)
 Frame = +3

Query: 15  KGWVKTATRVFQALRIAVNDELKTLEHALRACFDCLCCGGRLAVISFHSLEDRIVKQTFL 194
           +GW+KTATRVFQALRIAVNDELKTLE +L ACF+CL  GGRLAVISFHSLEDRIVKQTFL
Sbjct: 306 QGWIKTATRVFQALRIAVNDELKTLEDSLYACFECLTPGGRLAVISFHSLEDRIVKQTFL 365

Query: 195 DIINISNGGDGSRILDG------------------DAWVKQRIIGATGTILTKRPITPSE 320
           DIIN SNG D S    G                  +AW+KQ + G  GTILTKRPITPSE
Sbjct: 366 DIIN-SNGEDESGEGGGQEGCGKDLRNIRNDNDEKEAWIKQMVQGWNGTILTKRPITPSE 424

Query: 321 EEERLNYRCRSAKLRVVEK 377
           EEERLN R RSAKLRV++K
Sbjct: 425 EEERLNRRSRSAKLRVIQK 443


>ref|XP_004136324.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
           [Cucumis sativus] gi|449505500|ref|XP_004162490.1|
           PREDICTED: ribosomal RNA small subunit methyltransferase
           H-like [Cucumis sativus]
          Length = 448

 Score =  171 bits (432), Expect = 7e-41
 Identities = 86/127 (67%), Positives = 104/127 (81%), Gaps = 6/127 (4%)
 Frame = +3

Query: 15  KGWVKTATRVFQALRIAVNDELKTLEHALRACFDCLCCGGRLAVISFHSLEDRIVKQTFL 194
           +GW+KTATRVFQALRIAVNDEL  L+++L  CFDCL  GGRLAVISFHSLEDR+VKQTFL
Sbjct: 317 QGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFL 376

Query: 195 DIIN-----ISNGGDGSRIL-DGDAWVKQRIIGATGTILTKRPITPSEEEERLNYRCRSA 356
           DIIN       +GG+ ++I+ + + W+KQ + G  GT+LTKRPITPSEEEERLN R RSA
Sbjct: 377 DIINPKTEGDEDGGEVTKIMEENEEWIKQTVKGLKGTVLTKRPITPSEEEERLNRRSRSA 436

Query: 357 KLRVVEK 377
           KLRV++K
Sbjct: 437 KLRVIQK 443


>dbj|BAK07303.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 272

 Score =  168 bits (426), Expect = 4e-40
 Identities = 85/128 (66%), Positives = 101/128 (78%), Gaps = 7/128 (5%)
 Frame = +3

Query: 15  KGWVKTATRVFQALRIAVNDELKTLEHALRACFDCLCCGGRLAVISFHSLEDRIVKQTFL 194
           +GW+KTATRVFQALRIAVNDEL+TLE AL +CFDCL   GRLAVISFHSLEDRIVKQTFL
Sbjct: 144 QGWIKTATRVFQALRIAVNDELRTLEDALHSCFDCLATDGRLAVISFHSLEDRIVKQTFL 203

Query: 195 DIINISNG-GDGSRIL------DGDAWVKQRIIGATGTILTKRPITPSEEEERLNYRCRS 353
           ++I+     GD   +       + + W KQR+ G  GT+LTKRPITPS+EEE+LN RCRS
Sbjct: 204 ELIHGGEADGDDDDLAYADIDDEDEPWFKQRVQGTNGTVLTKRPITPSQEEEKLNQRCRS 263

Query: 354 AKLRVVEK 377
           AKLRV++K
Sbjct: 264 AKLRVIQK 271


>ref|NP_001045831.1| Os02g0137600 [Oryza sativa Japonica Group]
           gi|42409129|dbj|BAD10379.1| putative methyltransferase
           [Oryza sativa Japonica Group]
           gi|42409260|dbj|BAD10523.1| putative methyltransferase
           [Oryza sativa Japonica Group]
           gi|113535362|dbj|BAF07745.1| Os02g0137600 [Oryza sativa
           Japonica Group] gi|125538002|gb|EAY84397.1| hypothetical
           protein OsI_05773 [Oryza sativa Indica Group]
          Length = 436

 Score =  167 bits (424), Expect = 6e-40
 Identities = 86/128 (67%), Positives = 99/128 (77%), Gaps = 7/128 (5%)
 Frame = +3

Query: 15  KGWVKTATRVFQALRIAVNDELKTLEHALRACFDCLCCGGRLAVISFHSLEDRIVKQTFL 194
           +GW+KTATRVFQALRIAVNDEL+TLE AL ACFDCL   GRLAVISFHSLEDRIVKQTFL
Sbjct: 308 QGWIKTATRVFQALRIAVNDELRTLEDALHACFDCLATDGRLAVISFHSLEDRIVKQTFL 367

Query: 195 DIINISNGGDGSRIL-------DGDAWVKQRIIGATGTILTKRPITPSEEEERLNYRCRS 353
           ++I+     D    L       + + W KQR+ G  GTILTKRPI+PS+EEE LN RCRS
Sbjct: 368 ELIHEDEIDDDEDDLVSADIDSEDEPWFKQRVQGKNGTILTKRPISPSQEEEELNQRCRS 427

Query: 354 AKLRVVEK 377
           AKLRV++K
Sbjct: 428 AKLRVIQK 435