BLASTX nr result

ID: Cimicifuga21_contig00028401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028401
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271257.2| PREDICTED: uncharacterized protein LOC100243...   111   5e-23
ref|XP_002313643.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|XP_004145828.1| PREDICTED: uncharacterized protein LOC101215...    94   2e-17
ref|XP_002527438.1| DNA binding protein, putative [Ricinus commu...    92   3e-17
ref|XP_002872016.1| PHD finger family protein [Arabidopsis lyrat...    92   6e-17

>ref|XP_002271257.2| PREDICTED: uncharacterized protein LOC100243147 [Vitis vinifera]
          Length = 1582

 Score =  111 bits (278), Expect = 5e-23
 Identities = 59/108 (54%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
 Frame = -1

Query: 317 MESAELRAEVDVRGSLADGIDINGSANPLPPLNGPTRVHPKYSKTSACKDMEAINV--EP 144
           ++S ELRAE+D+R     GID +   N  PP NGP RVHP+YSKTSACKD EA+ +  E 
Sbjct: 333 LDSEELRAEIDMREESEIGIDPDSVTN-FPPENGPRRVHPRYSKTSACKDQEAMQIIAES 391

Query: 143 CNSNATHGTN-FGSKVTELDTGTTDVDQDANSDECQLCGMDGILLCCD 3
             +  +  +N  G K TELD    D DQD N DEC+LCGMDG LLCCD
Sbjct: 392 HETKLSRNSNSLGFKTTELDVNAAD-DQDVNGDECRLCGMDGTLLCCD 438


>ref|XP_002313643.1| predicted protein [Populus trichocarpa] gi|222850051|gb|EEE87598.1|
           predicted protein [Populus trichocarpa]
          Length = 1604

 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
 Frame = -1

Query: 317 MESAELRAEVDVRGSLADGIDINGSANPLPPLNGPTRVHPKYSKTSACKDMEAINVEPCN 138
           ++S ELRAEVD+      G+D +     + P NGPTRVHP+ SKTSACKD E +++   +
Sbjct: 330 LDSVELRAEVDICEESEVGLDPD-VVTAILPNNGPTRVHPRCSKTSACKDRETMDIIAGS 388

Query: 137 SNA---THGTNFGSKVTELDTGTTDVDQDANSDECQLCGMDGILLCCD 3
             +   ++  + GSK TE D   +D D D N DEC+LCG+DGILLCCD
Sbjct: 389 QGSKPFSNSKHLGSKGTERDGNASDADVDGNGDECRLCGIDGILLCCD 436


>ref|XP_004145828.1| PREDICTED: uncharacterized protein LOC101215849 [Cucumis sativus]
           gi|449510841|ref|XP_004163779.1| PREDICTED:
           uncharacterized LOC101215849 [Cucumis sativus]
          Length = 1719

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 55/111 (49%), Positives = 67/111 (60%), Gaps = 6/111 (5%)
 Frame = -1

Query: 317 MESAELRAEVDVRGSLADGIDINGSANPLPPLNGPTRVHPKYSKTSACKDMEAINVEPCN 138
           +ES ELRAE+D R     G+D +  A  L   NGP RVHP+Y KTSACKD EA+ +   N
Sbjct: 337 LESGELRAEIDAREISEVGLDYDAGATCLSE-NGPRRVHPRYPKTSACKDGEAMEIIVLN 395

Query: 137 SNATHGT--NF----GSKVTELDTGTTDVDQDANSDECQLCGMDGILLCCD 3
           +     +  NF    G    +LD   T VD + NSDEC+LCGMDG LLCCD
Sbjct: 396 NGTKSYSDQNFSGLKGGSNGDLDV--TAVDANRNSDECRLCGMDGSLLCCD 444


>ref|XP_002527438.1| DNA binding protein, putative [Ricinus communis]
           gi|223533173|gb|EEF34930.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 1723

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 50/105 (47%), Positives = 64/105 (60%)
 Frame = -1

Query: 317 MESAELRAEVDVRGSLADGIDINGSANPLPPLNGPTRVHPKYSKTSACKDMEAINVEPCN 138
           ++ AE+RAE+D R     G+D +  A  L   NGP RVHP+YSKTSACKD EA+ +   N
Sbjct: 331 LDCAEIRAEIDAREESEVGMDPDAIATSLSE-NGPRRVHPRYSKTSACKDKEAMEIIAEN 389

Query: 137 SNATHGTNFGSKVTELDTGTTDVDQDANSDECQLCGMDGILLCCD 3
                 ++  SK    +    +V  D NSDEC+LCGMDG LLCCD
Sbjct: 390 QGTK--SSCCSKYLGWEGDGHNVGMDGNSDECRLCGMDGTLLCCD 432


>ref|XP_002872016.1| PHD finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317853|gb|EFH48275.1| PHD finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1562

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 48/105 (45%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
 Frame = -1

Query: 308 AELRAEVDVRGSLADGIDINGSANPLPPLNGPTRVHPKYSKTSACKDMEAINVEPCN--- 138
           A++RAE+D R     G D +G    LP  NGP RVHP+++KTSACK+ E       N   
Sbjct: 323 ADIRAEMDTREESEVGFDPDGVTAELPE-NGPRRVHPRFAKTSACKEKELSEFVAVNHGI 381

Query: 137 SNATHGTNFGSKVTELDTGTTDVDQDANSDECQLCGMDGILLCCD 3
           S+     N  S+ T+        D D NSDEC+LCGMDG LLCCD
Sbjct: 382 SSLNESKNLSSRYTDCGPNGDSSDLDGNSDECRLCGMDGTLLCCD 426


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