BLASTX nr result

ID: Cimicifuga21_contig00028397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028397
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304369.1| nbs-lrr resistance protein [Populus trichoca...    68   7e-10
ref|XP_002519860.1| hypothetical protein RCOM_0865550 [Ricinus c...    63   3e-08
ref|XP_002867958.1| mob1/phocein family protein [Arabidopsis lyr...    59   3e-07
ref|NP_193640.4| NB-ARC domain-containing disease resistance pro...    58   9e-07
emb|CAA16762.1| putative protein [Arabidopsis thaliana] gi|72687...    58   9e-07

>ref|XP_002304369.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222841801|gb|EEE79348.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1265

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/103 (32%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
 Frame = +1

Query: 52   VEIKGANKFPTHLSNVLPNTQFLSIFNSGFVGKLSDFDIDKMRGIRECWIERCHGMGIVF 231
            +E+ G  K+PT +  VL  T+ +S+  +GF+  LS    D ++ ++ CW+ERC  M  +F
Sbjct: 1061 IELCGFEKYPTGVEYVLEQTECISLVENGFMKGLSSLGSDTLK-LKHCWLERCTEMENIF 1119

Query: 232  ESNAYIM--PSLQILWISNLSRLQTMCKTS*YGRRDFGNLKHI 354
              +  +    +L++LW+SNL++L+++C     G  +  NL+H+
Sbjct: 1120 SDHKDVKLGENLEVLWVSNLTKLKSLCSWK-VGSINLNNLQHL 1161


>ref|XP_002519860.1| hypothetical protein RCOM_0865550 [Ricinus communis]
           gi|223540906|gb|EEF42464.1| hypothetical protein
           RCOM_0865550 [Ricinus communis]
          Length = 301

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
 Frame = +1

Query: 43  RHRVEIKGANKFPTHLSNVLPNTQFLSIFNSGFVGKLSDFDIDKMRGIRECWIERCHGMG 222
           R  +EI+G ++FPT L NVL + ++LS+  + F+ +LSD  I  +R I+  W+E+C  + 
Sbjct: 215 RQTMEIRGFDEFPTGLDNVLKDVEYLSLVENPFMSRLSDLGIVNLRKIKGFWLEKCSKLK 274

Query: 223 IVF--ESNAYIMPSLQILWISNLSRLQ 297
            +   E++  +   L+ILWIS    +Q
Sbjct: 275 SILCDETDVKLGEDLEILWISIAKSMQ 301


>ref|XP_002867958.1| mob1/phocein family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297313794|gb|EFH44217.1| mob1/phocein family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1419

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
 Frame = +1

Query: 52   VEIKGANKFPTHLSNVLPNTQFLSIFNSGFVGKLSDFDIDKMRGIRECWIERCHGMGIVF 231
            V+IK A    T       N +++SI  +G     S FD  +MR ++ CW+ERC  M ++F
Sbjct: 985  VDIKRATDLKTES---FANAEYVSIAENGSKSVSSIFDECQMRSVKGCWVERCKNMDVLF 1041

Query: 232  ESN-------AYIMPSLQILWISNLSRLQTMCKTS*YGRRDFGNLKHISL 360
             S+       +  + SL+ LWISNL  L ++C +   G   F NLK +S+
Sbjct: 1042 VSDEQQEKEKSSSLSSLENLWISNLPLLTSLCSSK--GGFIFKNLKKLSV 1089


>ref|NP_193640.4| NB-ARC domain-containing disease resistance protein [Arabidopsis
            thaliana] gi|334302784|sp|P0CB16.2|DRL25_ARATH RecName:
            Full=Putative disease resistance protein At4g19050
            gi|332658734|gb|AEE84134.1| NB-ARC domain-containing
            disease resistance protein [Arabidopsis thaliana]
          Length = 1201

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
 Frame = +1

Query: 52   VEIKGANKFPTHLSNVLPNTQFLSIFNSGFVGKLSDFDIDKMRGIRECWIERCHGMGIVF 231
            V+IK +    T     +   +++SI  +G     S FD  +M  ++ CW+ERC  M ++F
Sbjct: 980  VDIKRSTDLKTEY---IAKAEYVSIAENGSKSVSSLFDELQMASVKGCWVERCKNMDVLF 1036

Query: 232  ESNAYI------MPSLQILWISNLSRLQTMCKTS*YGRRDFGNLKHISL 360
            ES+  +       PSLQ LWISNL  L ++  +   G   F NLK +S+
Sbjct: 1037 ESDEQLEKEKSSSPSLQTLWISNLPLLTSLYSSK--GGFIFKNLKKLSV 1083


>emb|CAA16762.1| putative protein [Arabidopsis thaliana] gi|7268700|emb|CAB78907.1|
            putative protein [Arabidopsis thaliana]
          Length = 1405

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
 Frame = +1

Query: 52   VEIKGANKFPTHLSNVLPNTQFLSIFNSGFVGKLSDFDIDKMRGIRECWIERCHGMGIVF 231
            V+IK +    T     +   +++SI  +G     S FD  +M  ++ CW+ERC  M ++F
Sbjct: 963  VDIKRSTDLKTEY---IAKAEYVSIAENGSKSVSSLFDELQMASVKGCWVERCKNMDVLF 1019

Query: 232  ESNAYI------MPSLQILWISNLSRLQTMCKTS*YGRRDFGNLKHISL 360
            ES+  +       PSLQ LWISNL  L ++  +   G   F NLK +S+
Sbjct: 1020 ESDEQLEKEKSSSPSLQTLWISNLPLLTSLYSSK--GGFIFKNLKKLSV 1066


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