BLASTX nr result

ID: Cimicifuga21_contig00028396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028396
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520030.1| conserved hypothetical protein [Ricinus comm...   144   1e-32
ref|XP_003550926.1| PREDICTED: uncharacterized protein LOC100813...   134   1e-29
ref|XP_002325816.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_002273912.1| PREDICTED: uncharacterized protein LOC100242...   127   7e-28
ref|XP_002871743.1| hypothetical protein ARALYDRAFT_488555 [Arab...   113   2e-23

>ref|XP_002520030.1| conserved hypothetical protein [Ricinus communis]
           gi|223540794|gb|EEF42354.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 245

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/103 (67%), Positives = 81/103 (78%)
 Frame = -1

Query: 463 RIPRNVTFLMPNDRTLSQISLPQPEEDSVYKFLLRHSIPSPLLFDHLQHFPTGSMVPTSE 284
           RI  N+TFLMPNDR LS+  +PQ    S+  FLL HSIPSPLLFDHLQH P+GS +P+S+
Sbjct: 59  RIQGNITFLMPNDRILSKSRIPQK---SLADFLLHHSIPSPLLFDHLQHIPSGSTIPSSD 115

Query: 283 PGLMLTVFNNGRRKFYLNNARIISPNICTAGSSIRCHGIRGVL 155
           P  ML + N GRR F+LN+ RIISPNICTAGSSIRCHGI GVL
Sbjct: 116 PDYMLDITNKGRRNFFLNDVRIISPNICTAGSSIRCHGIDGVL 158


>ref|XP_003550926.1| PREDICTED: uncharacterized protein LOC100813381 [Glycine max]
          Length = 250

 Score =  134 bits (336), Expect = 1e-29
 Identities = 66/102 (64%), Positives = 78/102 (76%)
 Frame = -1

Query: 460 IPRNVTFLMPNDRTLSQISLPQPEEDSVYKFLLRHSIPSPLLFDHLQHFPTGSMVPTSEP 281
           I  NVTFLMPNDR L+ + L   +E S+  FLLRHSIPSP+LFD L+ FPTG+ +PTS P
Sbjct: 58  IEGNVTFLMPNDRMLANMVL---QEGSISSFLLRHSIPSPMLFDVLEQFPTGTTIPTSLP 114

Query: 280 GLMLTVFNNGRRKFYLNNARIISPNICTAGSSIRCHGIRGVL 155
             ML V NNGR+ + LNN +IISPN+C AGSSIRCHGI GVL
Sbjct: 115 NCMLRVSNNGRKNYVLNNVKIISPNLCVAGSSIRCHGIDGVL 156


>ref|XP_002325816.1| predicted protein [Populus trichocarpa] gi|222862691|gb|EEF00198.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score =  133 bits (334), Expect = 2e-29
 Identities = 63/99 (63%), Positives = 78/99 (78%)
 Frame = -1

Query: 451 NVTFLMPNDRTLSQISLPQPEEDSVYKFLLRHSIPSPLLFDHLQHFPTGSMVPTSEPGLM 272
           NVTFLMP DR LS+I + Q   ++V  FLL HSIPSPLLFDHL+H P GS++P+S+P  M
Sbjct: 25  NVTFLMPKDRLLSKIRMHQ---NAVSDFLLHHSIPSPLLFDHLRHIPPGSLIPSSDPDYM 81

Query: 271 LTVFNNGRRKFYLNNARIISPNICTAGSSIRCHGIRGVL 155
           L + N GR+ F+LNN +I SP++CTAGSSIRCHGI GVL
Sbjct: 82  LNISNEGRKSFFLNNVKISSPDLCTAGSSIRCHGIDGVL 120


>ref|XP_002273912.1| PREDICTED: uncharacterized protein LOC100242484 [Vitis vinifera]
          Length = 256

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/99 (61%), Positives = 76/99 (76%)
 Frame = -1

Query: 451 NVTFLMPNDRTLSQISLPQPEEDSVYKFLLRHSIPSPLLFDHLQHFPTGSMVPTSEPGLM 272
           NVTFLMPNDRTLS+  +P     +V +FL RH++PSPLL DHL H PTGS++P+ EPG  
Sbjct: 65  NVTFLMPNDRTLSETMIPGY---AVSEFLKRHAVPSPLLIDHLLHIPTGSVLPSLEPGFS 121

Query: 271 LTVFNNGRRKFYLNNARIISPNICTAGSSIRCHGIRGVL 155
           L V N+GR+ F +NN RIISPNIC +G SIRCHG+ GV+
Sbjct: 122 LKVSNHGRQNFSINNVRIISPNICFSGYSIRCHGVDGVM 160


>ref|XP_002871743.1| hypothetical protein ARALYDRAFT_488555 [Arabidopsis lyrata subsp.
           lyrata] gi|297317580|gb|EFH48002.1| hypothetical protein
           ARALYDRAFT_488555 [Arabidopsis lyrata subsp. lyrata]
          Length = 249

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/103 (56%), Positives = 75/103 (72%)
 Frame = -1

Query: 463 RIPRNVTFLMPNDRTLSQISLPQPEEDSVYKFLLRHSIPSPLLFDHLQHFPTGSMVPTSE 284
           R   NVTFLMP D+TLS+ ++   ++DSV +FLLRHSIPS LLF+HL   P GS+VP+S 
Sbjct: 64  RFLANVTFLMPKDKTLSRSNIIN-QQDSVSEFLLRHSIPSSLLFEHLNLIPNGSIVPSSL 122

Query: 283 PGLMLTVFNNGRRKFYLNNARIISPNICTAGSSIRCHGIRGVL 155
           P   L + N GR  ++LNN +IIS NIC+ G SI+CHGI G+L
Sbjct: 123 PHYTLEISNGGRSNYFLNNVKIISRNICSLG-SIKCHGIDGIL 164


Top