BLASTX nr result

ID: Cimicifuga21_contig00028391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028391
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72978.1| hypothetical protein VITISV_009029 [Vitis vinifera]   145   3e-33
ref|XP_002267044.1| PREDICTED: 60S ribosomal protein L6, mitocho...   145   3e-33
ref|XP_002527470.1| 50S ribosomal protein L6, putative [Ricinus ...   141   5e-32
ref|XP_004143514.1| PREDICTED: 60S ribosomal protein L6, mitocho...   139   2e-31
ref|NP_001235881.1| uncharacterized protein LOC100527168 [Glycin...   137   9e-31

>emb|CAN72978.1| hypothetical protein VITISV_009029 [Vitis vinifera]
          Length = 102

 Score =  145 bits (367), Expect = 3e-33
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = +3

Query: 24  MEAKFFRFLKIVGVGFKARAESEGRLLYLKLGYSHEVELTVPPAVRVFCFKPNVVCCTGI 203
           MEAKFFRFLKIVGVGFKARAESEGRLL+LKLGYSHEVELTVPPAVRVFCFKPNVVCCTGI
Sbjct: 1   MEAKFFRFLKIVGVGFKARAESEGRLLFLKLGYSHEVELTVPPAVRVFCFKPNVVCCTGI 60

Query: 204 DKQRVHQFAAA 236
           DKQRVHQFAAA
Sbjct: 61  DKQRVHQFAAA 71


>ref|XP_002267044.1| PREDICTED: 60S ribosomal protein L6, mitochondrial [Vitis vinifera]
           gi|297735153|emb|CBI17515.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score =  145 bits (366), Expect = 3e-33
 Identities = 69/71 (97%), Positives = 71/71 (100%)
 Frame = +3

Query: 24  MEAKFFRFLKIVGVGFKARAESEGRLLYLKLGYSHEVELTVPPAVRVFCFKPNVVCCTGI 203
           MEAKFFRFLKIVGVGFKARAESEGRLL+LKLGYSHEVELTVPPAVRVFCFKPN+VCCTGI
Sbjct: 1   MEAKFFRFLKIVGVGFKARAESEGRLLFLKLGYSHEVELTVPPAVRVFCFKPNIVCCTGI 60

Query: 204 DKQRVHQFAAA 236
           DKQRVHQFAAA
Sbjct: 61  DKQRVHQFAAA 71


>ref|XP_002527470.1| 50S ribosomal protein L6, putative [Ricinus communis]
           gi|223533110|gb|EEF34868.1| 50S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 102

 Score =  141 bits (356), Expect = 5e-32
 Identities = 68/71 (95%), Positives = 70/71 (98%)
 Frame = +3

Query: 24  MEAKFFRFLKIVGVGFKARAESEGRLLYLKLGYSHEVELTVPPAVRVFCFKPNVVCCTGI 203
           MEAKFFRFLKIVGVG+KARAESEGRLLYLKLGYSHEVELTVPPAVRVFCFK NVVCCTGI
Sbjct: 1   MEAKFFRFLKIVGVGYKARAESEGRLLYLKLGYSHEVELTVPPAVRVFCFKNNVVCCTGI 60

Query: 204 DKQRVHQFAAA 236
           DKQRVHQFAA+
Sbjct: 61  DKQRVHQFAAS 71


>ref|XP_004143514.1| PREDICTED: 60S ribosomal protein L6, mitochondrial-like [Cucumis
           sativus] gi|449496483|ref|XP_004160146.1| PREDICTED: 60S
           ribosomal protein L6, mitochondrial-like [Cucumis
           sativus]
          Length = 102

 Score =  139 bits (350), Expect = 2e-31
 Identities = 67/71 (94%), Positives = 69/71 (97%)
 Frame = +3

Query: 24  MEAKFFRFLKIVGVGFKARAESEGRLLYLKLGYSHEVELTVPPAVRVFCFKPNVVCCTGI 203
           MEAKFFRFLKIVGVG+KARAE+ GRLLYLKLGYSHEVELTVPPAVRVFCFK NVVCCTGI
Sbjct: 1   MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELTVPPAVRVFCFKNNVVCCTGI 60

Query: 204 DKQRVHQFAAA 236
           DKQRVHQFAAA
Sbjct: 61  DKQRVHQFAAA 71


>ref|NP_001235881.1| uncharacterized protein LOC100527168 [Glycine max]
           gi|255631702|gb|ACU16218.1| unknown [Glycine max]
          Length = 102

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/70 (92%), Positives = 68/70 (97%)
 Frame = +3

Query: 24  MEAKFFRFLKIVGVGFKARAESEGRLLYLKLGYSHEVELTVPPAVRVFCFKPNVVCCTGI 203
           MEAKFFRFLKIVGVG+KARAE+ GRLLYLKLGYSHEVELTVPPAVRVFCFK NV+CCTGI
Sbjct: 1   MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELTVPPAVRVFCFKNNVICCTGI 60

Query: 204 DKQRVHQFAA 233
           DKQRVHQFAA
Sbjct: 61  DKQRVHQFAA 70


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