BLASTX nr result

ID: Cimicifuga21_contig00028383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028383
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599499.1| F-box protein [Medicago truncatula] gi|35548...    63   3e-08
ref|XP_003528639.1| PREDICTED: F-box/kelch-repeat protein At3g06...    59   5e-07
ref|XP_003599496.1| F-box [Medicago truncatula] gi|355488544|gb|...    57   1e-06
ref|XP_003605042.1| F-box/kelch-repeat protein [Medicago truncat...    56   4e-06
gb|AAT39292.1| Putative F-box domain containing protein, identic...    56   4e-06

>ref|XP_003599499.1| F-box protein [Medicago truncatula] gi|355488547|gb|AES69750.1|
           F-box protein [Medicago truncatula]
          Length = 489

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/53 (54%), Positives = 39/53 (73%)
 Frame = +2

Query: 182 DCIAMEDSAKKIKKSLPHDLVIDILLRLPVKSLLRFRCVSKTWLRLLTTDHHF 340
           +CI      KK    LPH+L+I I+LRLPVKSL+RF+CV K+WL L+ +DH+F
Sbjct: 108 NCIGGRQMEKKTDLYLPHELIIQIMLRLPVKSLIRFKCVCKSWLALI-SDHNF 159


>ref|XP_003528639.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 375

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +2

Query: 227 LPHDLVIDILLRLPVKSLLRFRCVSKTWLRLLTTDH 334
           LP +L+I ILLRLPVKSLLRF+CVSK+WL L+T  H
Sbjct: 18  LPQELIIQILLRLPVKSLLRFKCVSKSWLSLITDPH 53


>ref|XP_003599496.1| F-box [Medicago truncatula] gi|355488544|gb|AES69747.1| F-box
           [Medicago truncatula]
          Length = 370

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/36 (66%), Positives = 31/36 (86%)
 Frame = +2

Query: 227 LPHDLVIDILLRLPVKSLLRFRCVSKTWLRLLTTDH 334
           LPH+L+I ILLRLPVKSL+RF+CV K+WL L++  H
Sbjct: 9   LPHELIIQILLRLPVKSLIRFKCVCKSWLTLISDPH 44


>ref|XP_003605042.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355506097|gb|AES87239.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 357

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/42 (59%), Positives = 31/42 (73%)
 Frame = +2

Query: 209 KKIKKSLPHDLVIDILLRLPVKSLLRFRCVSKTWLRLLTTDH 334
           KK    LPHDL+I ILLRLPVK L+RF+CV K+W  L++  H
Sbjct: 4   KKTSVHLPHDLIILILLRLPVKYLIRFKCVCKSWFSLISEPH 45


>gb|AAT39292.1| Putative F-box domain containing protein, identical [Solanum
           demissum]
          Length = 307

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 23/41 (56%), Positives = 34/41 (82%)
 Frame = +2

Query: 206 AKKIKKSLPHDLVIDILLRLPVKSLLRFRCVSKTWLRLLTT 328
           A+ I   LPH+++++ILL++P KSLL+F CVSKTWL L+T+
Sbjct: 2   AESIISVLPHEIIVEILLKVPPKSLLKFTCVSKTWLELITS 42


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