BLASTX nr result
ID: Cimicifuga21_contig00028378
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00028378
(1513 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g... 185 3e-44
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin... 162 3e-37
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23... 161 5e-37
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ... 154 8e-35
ref|XP_002307880.1| predicted protein [Populus trichocarpa] gi|2... 154 8e-35
>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
gi|222854763|gb|EEE92310.1| f-box family protein [Populus
trichocarpa]
Length = 396
Score = 185 bits (469), Expect = 3e-44
Identities = 135/385 (35%), Positives = 199/385 (51%), Gaps = 20/385 (5%)
Frame = +3
Query: 129 ISNISEDLLMEILCRLPIKFIVQCKCVCKPWCTLVTTTRFIKFHLDRANQKSPNLILASN 308
+S + +++ EILCRLP K ++ C+ V KPWC L+ F+K HL + S NL +
Sbjct: 1 MSGLPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILR 60
Query: 309 FHRNFYSLDCE---TCDECVHLNLNLPPLL----GISIVGSCNGLLCLSDYEFFVLLWNP 467
+ + +D E ++CV L PL+ GI ++GS NGLLC+S+ + +WNP
Sbjct: 61 TTSHVHYMDFEQNLVLNDCVTLKELNHPLMCYNHGIKVLGSVNGLLCISNVVDDIAVWNP 120
Query: 468 STGEYIQLVRDGLARSPENSANWICENERSTVAMGFGYDSVAEEYKLVRIEYFYDVFRSG 647
ST ++ + P + S GFGYDSV ++YKLVRI F G
Sbjct: 121 STRKH-----RVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQ----FGGG 171
Query: 648 TMTEFERCEVKVYTLGTNYWRLIDDTPSPPCYIGNLIRVAHVNGVLYWVGLRGIGIELSK 827
FE EVKVY+L WR I D P Y G NG L+WV ++
Sbjct: 172 GKRSFE-SEVKVYSLRKQSWRRIGDMPYCVHYPG--ANGVFANGALHWVVGENPESNVAN 228
Query: 828 SIVYFDLRNEKFGNFLWPEFEDHSYRDLRLGVLQGFLCTFSYHL-DRIDLWVM-----KE 989
+V DL E + L PE++D ++ + LGVL+G LC + L +R+D+W+M KE
Sbjct: 229 IVVALDLGVEDYREVLQPEYKDKNFY-IDLGVLRGCLCFLANFLGERVDVWMMKEYGVKE 287
Query: 990 SWTRQFSIAR-----STKYLEPLLL-KNG-EILLQTGHRGRGLLLYDPVNEIVRVPRVRG 1148
SWT+ FS+A+ + L+PL K+G E+L++ H L YD + V+ R+ G
Sbjct: 288 SWTKLFSVAQYEVIGFLRSLKPLAYSKSGDEVLIE--HDNLDLCWYDLKRKQVK-NRIPG 344
Query: 1149 IPDWFRTSTYVESLIAIASLMRMDG 1223
IP F T+VESLI+++ +DG
Sbjct: 345 IPYSFEADTFVESLISVSPNRHLDG 369
>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
gi|255637050|gb|ACU18857.1| unknown [Glycine max]
Length = 406
Score = 162 bits (409), Expect = 3e-37
Identities = 127/387 (32%), Positives = 177/387 (45%), Gaps = 34/387 (8%)
Frame = +3
Query: 138 ISEDLLMEILCRLPIKFIVQCKCVCKPWCTLVTTTRFIKFHL---DRANQKSPNLILASN 308
+ ++L++EIL RLP+K ++Q +CVCK W +L++ F+K HL R + + I+ S
Sbjct: 49 LPDELVVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHLHLSSRCTHFTHHRIILSA 108
Query: 309 FHRNFYSLDCE-----------TCDECVHLNLNLP---PLLGISIVGSCNGLLCLSDYEF 446
F+ C CD+ LN P IVGSCNGLLC +
Sbjct: 109 TTAEFHLKSCSLSSLFNNPSSTVCDD-----LNYPVKNKFRHDGIVGSCNGLLCFAIKGD 163
Query: 447 FVLLWNPSTGEYIQLVRDGLARSPENSANWICENERSTVAMGFGYDSVAEEYKLVRI--- 617
VLLWNPS I++ + +SP NW A G GYD V E+YK+V +
Sbjct: 164 CVLLWNPS----IRVSK----KSPPLGNNW---RPGCFTAFGLGYDHVNEDYKVVAVFCD 212
Query: 618 --EYFYDVFRSGTMTEFERCEVKVYTLGTNYWRLIDDTPSPPCYIGNLIRVAHVNGVLYW 791
EYF + C+VKVY++ TN WR I D P N + V+G L W
Sbjct: 213 PSEYFIE------------CKVKVYSMATNSWRKIQDFPHGFLPFQNSGK--FVSGTLNW 258
Query: 792 VGLRGIGIELSKSIVYFDLRNEKFGNFLWPEFEDHSYRDLRLGVLQGFLC-TFSYHLDRI 968
IG IV DL E + L P++E LGVLQG LC + Y
Sbjct: 259 AANHSIGPSSFWVIVSLDLHKETYREVLPPDYEKEDCSTPSLGVLQGCLCMNYDYKKTHF 318
Query: 969 DLWVMK-----ESWTRQFSI-----ARSTKYLEPLLL-KNGEILLQTGHRGRGLLLYDPV 1115
+W+MK ESW + SI Y P + +NG++LL L+LYDP
Sbjct: 319 VVWMMKDYGVRESWVKLVSIPYVPNPEDFSYSGPYYISENGKVLLMFEF---DLILYDPR 375
Query: 1116 NEIVRVPRVRGIPDWFRTSTYVESLIA 1196
N + P++ WF YVE+L++
Sbjct: 376 NNSFKYPKIESGKGWFDAEVYVETLVS 402
>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
Length = 405
Score = 161 bits (407), Expect = 5e-37
Identities = 129/389 (33%), Positives = 179/389 (46%), Gaps = 36/389 (9%)
Frame = +3
Query: 138 ISEDLLMEILCRLPIKFIVQCKCVCKPWCTLVTTTRFIKFHL---DRANQKSPNLILASN 308
+ ++L++EIL RLP+K ++Q +CVCK W +L+ F+K HL R+ + + I+ S
Sbjct: 49 LPDELVVEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMKKHLHLSSRSTHFTHHRIILSA 108
Query: 309 FHRNFYSLDCE----------TCDECVHLNLNLP---PLLGISIVGSCNGLLCLSDYEFF 449
F+ C CDE LN P IVGSCNGLLC +
Sbjct: 109 TTAEFHLKSCSLSSLFNNLSTVCDE-----LNYPVKNKFRHDGIVGSCNGLLCFAIKGDC 163
Query: 450 VLLWNPSTGEYIQLVRDGLARSPENSANWICENERSTVAMGFGYDSVAEEYKLVRI---- 617
VLLWNPS I++ + +SP NW A G GYD V E+YK+V +
Sbjct: 164 VLLWNPS----IRVSK----KSPPLGNNW---RPGCFTAFGLGYDHVNEDYKVVAVFCDP 212
Query: 618 -EYFYDVFRSGTMTEFERCEVKVYTLGTNYWRLIDDTP---SPPCYIGNLIRVAHVNGVL 785
EYF + C+VKVY++ TN WR I D P SP G V+G L
Sbjct: 213 SEYFIE------------CKVKVYSMATNSWRKIQDFPHGFSPFQNSGKF-----VSGTL 255
Query: 786 YWVGLRGIGIELSKSIVYFDLRNEKFGNFLWPEFEDHSYRDLRLGVLQGFLC-TFSYHLD 962
W IG IV DL E + L P++E LGVLQG LC + Y
Sbjct: 256 NWAANHSIGSSSLWVIVSLDLHKETYREVLPPDYEKEDCSTPGLGVLQGCLCMNYDYKKT 315
Query: 963 RIDLWVMK-----ESWTRQFSI-----ARSTKYLEPLLL-KNGEILLQTGHRGRGLLLYD 1109
+W+MK ESW + SI + Y P + +NGE+LL L+LY+
Sbjct: 316 HFVVWMMKDYGARESWVKLVSIPYVPNPENFSYSGPYYISENGEVLLMFEF---DLILYN 372
Query: 1110 PVNEIVRVPRVRGIPDWFRTSTYVESLIA 1196
P + + P++ WF YVE+L++
Sbjct: 373 PRDNSFKYPKIESGKGWFDAEVYVETLVS 401
>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 389
Score = 154 bits (388), Expect = 8e-35
Identities = 128/376 (34%), Positives = 188/376 (50%), Gaps = 19/376 (5%)
Frame = +3
Query: 129 ISNISEDLLMEILCRLPIKFIVQCKCVCKPWCTLVTTTRFIKFHLDRANQKSPNL--ILA 302
+SN+ +++ EILCRL K ++ C+CV K W TL+ + FI HL+ + + NL IL
Sbjct: 1 MSNLPLEMIAEILCRLTAKKLLCCRCVSKRWRTLIDSPTFIYLHLNHSIESPCNLSIILK 60
Query: 303 SNFHRNFYSLDCETCDECVHLNLNLPPLL----GISIVGSCNGLLCLSDYEFFVLLWNPS 470
S+ YSL + D L+ PL+ G+ I+GSCNGLLC+ + + LWNPS
Sbjct: 61 SS---ELYSLSFDLLDNIQPLD---HPLMCYNHGVKILGSCNGLLCICNIVDDIALWNPS 114
Query: 471 TGEYIQLVRDGLARSPENSANWICENERSTVAMGFGYDSVAEEYKLVRIEYFYDVFRSGT 650
+ + P + GFGYD ++YKLVRI F V R
Sbjct: 115 IRAH-----RVVPYLPVELKRYFGMCSCRVSVFGFGYDLSNDDYKLVRIAQFGGVDRK-- 167
Query: 651 MTEFERCEVKVYTLGTNYWRLIDDTPSPPCYIGNLIRVAHVNGVLYWVGLRGIGIELSKS 830
FE EVKV++L N WR I D P Y G + NG L+W+ + ++ +
Sbjct: 168 --SFE-SEVKVFSLRKNSWRRIADMPYCVLYPGE--NGIYANGALHWLVSQDPDSTVADT 222
Query: 831 IVYFDLRNEKFGNFLWPEFEDHSYRDLRLGVLQGFLCTFSY-HLDRIDLWVM-----KES 992
IV DL E + PEF D + ++ +GVLQG L +Y +R+D+WVM KES
Sbjct: 223 IVALDLGVEDYHVVPKPEFVDMNC-NMGVGVLQGCLSLLAYARSERVDVWVMEEYMVKES 281
Query: 993 WTRQFSIAR-----STKYLEPLLL-KNG-EILLQTGHRGRGLLLYDPVNEIVRVPRVRGI 1151
W++ FS+AR + L+PL K+G E+L++ H L YD + V ++G+
Sbjct: 282 WSKLFSVARLEVIGILRSLKPLAYSKSGNEVLIE--HDNVNLFWYDLKRKEVVNVWIQGV 339
Query: 1152 PDWFRTSTYVESLIAI 1199
P F V SL+ +
Sbjct: 340 PITFEAEICVGSLVPL 355
>ref|XP_002307880.1| predicted protein [Populus trichocarpa] gi|222853856|gb|EEE91403.1|
predicted protein [Populus trichocarpa]
Length = 380
Score = 154 bits (388), Expect = 8e-35
Identities = 120/375 (32%), Positives = 178/375 (47%), Gaps = 18/375 (4%)
Frame = +3
Query: 126 MISNISEDLLMEILCRLPIKFIVQCKCVCKPWCTLVTTTRFIKFHLDRANQKSPNLILAS 305
M +NI D++ +IL RLP+K + + K V K + F+K HL RAN K+PNL+L
Sbjct: 17 MSANIPSDIISDILTRLPVKSLTRFKSVSKSMLAFLGNPEFVKQHLKRANLKNPNLVLKH 76
Query: 306 NFHRNFYSLDCETCDECVHLNLNLPPLL-GISIVGSCNGLLCLSDYEF--FVLLWNPSTG 476
+ + FY D E + L L L + I GSCNG+LC+SD + + L NPSTG
Sbjct: 77 D-SKLFYVED-EEWSKARRLPLPFSLCLEKVEISGSCNGILCISDQQCNQDIFLLNPSTG 134
Query: 477 EYIQLVRDGLARSPENSANWICENERSTVAMGFGYDSVAEEYKLVRIEYFYDVFRSGTMT 656
+ L G I E S MGFGY ++YK++R Y YD +
Sbjct: 135 VFKHLPFSGFD---------IAAVENSFTTMGFGYHQAEDDYKVIRCVYIYD--KPFIDI 183
Query: 657 EFERCEVKVYTLGTNYWRLIDDTPSPPCYIGNLIRVAHVNGVLYWVGLRGIGIELSKSIV 836
+ CE +VY+L W+ D + P ++G + N L W G+G IV
Sbjct: 184 DSYECEARVYSLKAGEWK---DIGTIPYHLGYKAAIWLGNDFLIWKATIGLGRTGRYLIV 240
Query: 837 YFDLRNEKFGNFLWPEFEDHSYRDLRLGVLQGFLCTFSY-HLDRIDLWVMKE-----SWT 998
+D+ E+F P + + + V G L TF D +W MKE SW
Sbjct: 241 SYDMSKEEFKEIPQPIVNYNDELHMEVSVFDGLLSTFYLSKYDEAHIWSMKEYGVTDSWE 300
Query: 999 RQFSIARSTK-------YLEPL-LLKNGEILLQTGHRGRGLLLYDPVNEIVRVPR-VRGI 1151
+ I + +L+PL +LKNGEIL++ G + R +L+DP + R+ +RG+
Sbjct: 301 LRVVIKLPWRVENYNYIFLKPLTILKNGEILIEAGEKAR--ILHDPKKDSYRIINPIRGV 358
Query: 1152 PDWFRTSTYVESLIA 1196
P F + V SL++
Sbjct: 359 PRRFLVTPIVGSLVS 373