BLASTX nr result

ID: Cimicifuga21_contig00028363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028363
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284551.1| PREDICTED: uncharacterized protein LOC100267...   107   8e-22
gb|AAC33276.1| cotton fiber expressed protein 1 [Gossypium hirsu...   107   1e-21
gb|AAY85179.1| fiber expressed protein [Gossypium hirsutum]           105   4e-21
ref|XP_002316652.1| predicted protein [Populus trichocarpa] gi|2...   104   9e-21
gb|ABK92540.1| unknown [Populus trichocarpa]                          102   4e-20

>ref|XP_002284551.1| PREDICTED: uncharacterized protein LOC100267532 [Vitis vinifera]
          Length = 320

 Score =  107 bits (268), Expect = 8e-22
 Identities = 55/70 (78%), Positives = 59/70 (84%), Gaps = 2/70 (2%)
 Frame = +2

Query: 11  KMKKCETFKDR--TNIPAASSPGSGKLKKEPSLSHDELNRRVEAFINKFNEEMRLQRQES 184
           K+KK ETF DR  TN   ASSPGSGK+K+EPSLS DELNRRVEAFI KFNEEMRLQRQES
Sbjct: 248 KVKKSETFTDRSSTNSSVASSPGSGKMKREPSLSQDELNRRVEAFIKKFNEEMRLQRQES 307

Query: 185 LNQYKEMVNR 214
           LNQY EM+ R
Sbjct: 308 LNQYNEMIRR 317


>gb|AAC33276.1| cotton fiber expressed protein 1 [Gossypium hirsutum]
          Length = 331

 Score =  107 bits (267), Expect = 1e-21
 Identities = 56/75 (74%), Positives = 60/75 (80%), Gaps = 5/75 (6%)
 Frame = +2

Query: 5   SPKMKKCETFKDRTNIP-----AASSPGSGKLKKEPSLSHDELNRRVEAFINKFNEEMRL 169
           SP MKK ETF+DRTN        +S P SGKL+KEPSLS DELNRRVEAFI KFN+EMRL
Sbjct: 255 SPLMKKSETFRDRTNYQLPPEQVSSFPASGKLRKEPSLSQDELNRRVEAFIKKFNDEMRL 314

Query: 170 QRQESLNQYKEMVNR 214
           QRQESLNQY EMVNR
Sbjct: 315 QRQESLNQYMEMVNR 329


>gb|AAY85179.1| fiber expressed protein [Gossypium hirsutum]
          Length = 331

 Score =  105 bits (262), Expect = 4e-21
 Identities = 55/75 (73%), Positives = 60/75 (80%), Gaps = 5/75 (6%)
 Frame = +2

Query: 5   SPKMKKCETFKDRTNIP-----AASSPGSGKLKKEPSLSHDELNRRVEAFINKFNEEMRL 169
           SP MKK ETF+DRTN        +S P SGKL+KEPSLS DELNRRVEAFI KFN+EMRL
Sbjct: 255 SPLMKKSETFRDRTNYQLPPEQVSSFPASGKLRKEPSLSQDELNRRVEAFIKKFNDEMRL 314

Query: 170 QRQESLNQYKEMVNR 214
           QRQESLNQY EMV+R
Sbjct: 315 QRQESLNQYMEMVDR 329


>ref|XP_002316652.1| predicted protein [Populus trichocarpa] gi|222859717|gb|EEE97264.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  104 bits (259), Expect = 9e-21
 Identities = 54/72 (75%), Positives = 60/72 (83%), Gaps = 4/72 (5%)
 Frame = +2

Query: 11  KMKKCETFKDRTN----IPAASSPGSGKLKKEPSLSHDELNRRVEAFINKFNEEMRLQRQ 178
           ++KK  TFKDRTN    +  +SSP SGKL+KEPSLS DELNRRVEAFI KFNEEMRLQRQ
Sbjct: 252 EVKKSTTFKDRTNYQLPLVNSSSPSSGKLRKEPSLSQDELNRRVEAFIKKFNEEMRLQRQ 311

Query: 179 ESLNQYKEMVNR 214
           ESLNQYKEM +R
Sbjct: 312 ESLNQYKEMTSR 323


>gb|ABK92540.1| unknown [Populus trichocarpa]
          Length = 354

 Score =  102 bits (253), Expect = 4e-20
 Identities = 53/72 (73%), Positives = 59/72 (81%), Gaps = 4/72 (5%)
 Frame = +2

Query: 11  KMKKCETFKDRTN----IPAASSPGSGKLKKEPSLSHDELNRRVEAFINKFNEEMRLQRQ 178
           ++KK  TFKD TN    +  +SSP SGKL+KEPSLS DELNRRVEAFI KFNEEMRLQRQ
Sbjct: 276 EVKKSTTFKDTTNYQLPLVNSSSPSSGKLRKEPSLSQDELNRRVEAFIKKFNEEMRLQRQ 335

Query: 179 ESLNQYKEMVNR 214
           ESLNQYKEM +R
Sbjct: 336 ESLNQYKEMTSR 347


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