BLASTX nr result

ID: Cimicifuga21_contig00028359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028359
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326013.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31
ref|XP_002534289.1| Angio-associated migratory cell protein, put...   135   3e-30
ref|XP_002327217.1| predicted protein [Populus trichocarpa] gi|2...   135   4e-30
ref|XP_004162166.1| PREDICTED: vegetative incompatibility protei...   130   8e-29
ref|XP_004138371.1| PREDICTED: vegetative incompatibility protei...   130   8e-29

>ref|XP_002326013.1| predicted protein [Populus trichocarpa] gi|222862888|gb|EEF00395.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score =  137 bits (346), Expect = 7e-31
 Identities = 62/104 (59%), Positives = 78/104 (75%)
 Frame = -3

Query: 358 PWAAIVGSDEIVVIWDMQHSSLRLTCVHEARVTCLAWLGASRYFATGCEDGAILIWDSLS 179
           PWAA  G D+ ++IWD+QHS  R TC H+  VTC+AWLGASRY ATGC DG + +WDSLS
Sbjct: 287 PWAATGGLDQKLIIWDLQHSLPRATCEHQDGVTCVAWLGASRYVATGCVDGKVRLWDSLS 346

Query: 178 GDHVKTFCGHTKTILSLSISCNAEFLISASQNKTARVFRIAEFR 47
           GD ++TF GH   I SLS+S N ++L+S S + TARVF IAEF+
Sbjct: 347 GDCIRTFSGHADAIQSLSLSANQDYLVSGSSDGTARVFEIAEFK 390


>ref|XP_002534289.1| Angio-associated migratory cell protein, putative [Ricinus
           communis] gi|223525567|gb|EEF28092.1| Angio-associated
           migratory cell protein, putative [Ricinus communis]
          Length = 355

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/104 (61%), Positives = 76/104 (73%)
 Frame = -3

Query: 358 PWAAIVGSDEIVVIWDMQHSSLRLTCVHEARVTCLAWLGASRYFATGCEDGAILIWDSLS 179
           PWAA    D  ++IWD+QHS  R TC H+  VTCL WLGAS+Y ATGC DG + IWDSLS
Sbjct: 252 PWAATGSMDNKLIIWDLQHSLSRCTCDHQDGVTCLTWLGASKYVATGCLDGKVRIWDSLS 311

Query: 178 GDHVKTFCGHTKTILSLSISCNAEFLISASQNKTARVFRIAEFR 47
           GD V+TF GH   I S+S+S N +FL+SAS + TARVF IAEFR
Sbjct: 312 GDCVRTFSGHAAAIQSVSLSANLDFLVSASIDGTARVFEIAEFR 355


>ref|XP_002327217.1| predicted protein [Populus trichocarpa] gi|222835587|gb|EEE74022.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  135 bits (339), Expect = 4e-30
 Identities = 61/104 (58%), Positives = 77/104 (74%)
 Frame = -3

Query: 358 PWAAIVGSDEIVVIWDMQHSSLRLTCVHEARVTCLAWLGASRYFATGCEDGAILIWDSLS 179
           PWAA  G D+ ++IWD+QHS  R +C H+  VTCLAWLGASRY ATGC DG + +WDSLS
Sbjct: 275 PWAATGGLDQKLIIWDLQHSLPRASCEHKDGVTCLAWLGASRYVATGCVDGKVRLWDSLS 334

Query: 178 GDHVKTFCGHTKTILSLSISCNAEFLISASQNKTARVFRIAEFR 47
           GD ++ F GH   + SLSIS N ++L+S S + TARVF IAEF+
Sbjct: 335 GDCIRIFSGHADAVQSLSISANQDYLVSGSSDGTARVFEIAEFK 378


>ref|XP_004162166.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Cucumis
           sativus]
          Length = 392

 Score =  130 bits (328), Expect = 8e-29
 Identities = 58/103 (56%), Positives = 75/103 (72%)
 Frame = -3

Query: 358 PWAAIVGSDEIVVIWDMQHSSLRLTCVHEARVTCLAWLGASRYFATGCEDGAILIWDSLS 179
           PWAA  G D+ ++IWD+Q S+ R TC HE  VTCL W+G SRY ATGC DG + IWDSLS
Sbjct: 289 PWAATGGMDQKLIIWDLQQSTPRSTCQHEDGVTCLTWIGTSRYLATGCVDGRVRIWDSLS 348

Query: 178 GDHVKTFCGHTKTILSLSISCNAEFLISASQNKTARVFRIAEF 50
           G+ VKTF GH+  I SL++  N E+L+S + + TAR+F IAE+
Sbjct: 349 GECVKTFSGHSDAIQSLAVCANLEYLVSVALDNTARIFEIAEY 391


>ref|XP_004138371.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Cucumis
           sativus]
          Length = 392

 Score =  130 bits (328), Expect = 8e-29
 Identities = 58/103 (56%), Positives = 75/103 (72%)
 Frame = -3

Query: 358 PWAAIVGSDEIVVIWDMQHSSLRLTCVHEARVTCLAWLGASRYFATGCEDGAILIWDSLS 179
           PWAA  G D+ ++IWD+Q S+ R TC HE  VTCL W+G SRY ATGC DG + IWDSLS
Sbjct: 289 PWAATGGMDQKLIIWDLQQSTPRSTCQHEDGVTCLTWIGTSRYLATGCVDGRVRIWDSLS 348

Query: 178 GDHVKTFCGHTKTILSLSISCNAEFLISASQNKTARVFRIAEF 50
           G+ VKTF GH+  I SL++  N E+L+S + + TAR+F IAE+
Sbjct: 349 GECVKTFSGHSDAIQSLAVCANLEYLVSVALDNTARIFEIAEY 391


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