BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028356
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304609.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containi...    65   4e-09
ref|XP_003626108.1| Pentatricopeptide repeat-containing protein ...    55   5e-06

>ref|XP_002304609.1| predicted protein [Populus trichocarpa] gi|222842041|gb|EEE79588.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/64 (54%), Positives = 49/64 (76%)
 Frame = +3

Query: 129 RSLTSWASAIRNAASPQEALHLYTCMQLLAIPFDSYSILFTLKSCSRLHNVTLTRHLHAH 308
           +S  +W  AI+NA+SP +AL LYT M   +IPFD++SILFTLKSC+ L N+T+  HLH+H
Sbjct: 19  KSYNTWVLAIKNASSPHKALQLYTHMHRQSIPFDTFSILFTLKSCTHLKNLTIIHHLHSH 78

Query: 309 LCKI 320
           + K+
Sbjct: 79  IIKL 82


>ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 436

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/64 (45%), Positives = 44/64 (68%)
 Frame = +3

Query: 129 RSLTSWASAIRNAASPQEALHLYTCMQLLAIPFDSYSILFTLKSCSRLHNVTLTRHLHAH 308
           + + SWA  IRNA S  +AL  Y+ M   ++P DS+SILF LK+C+  +N+++  HLHAH
Sbjct: 22  KGVNSWALRIRNAPSLHKALAFYSQMHRQSVPHDSFSILFMLKACASSNNLSILHHLHAH 81

Query: 309 LCKI 320
           + K+
Sbjct: 82  ITKL 85


>ref|XP_003626108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240992|gb|ABD32850.1| Pentatricopeptide repeat
           [Medicago truncatula] gi|355501123|gb|AES82326.1|
           Pentatricopeptide repeat-containing protein [Medicago
           truncatula]
          Length = 417

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
 Frame = +3

Query: 141 SWASAIRNA---ASPQEALHLYTCMQLLAIPFDSYSILFTLKSCSRLHNVTLTRHLHAHL 311
           SWA AI+ A   +SP++A+ LY+ M    +P D++ ILFTLKS +RL    +  HLHAH+
Sbjct: 4   SWALAIKKAYSSSSPRKAIQLYSKMHRNGVPIDTFCILFTLKSSTRL---PIIHHLHAHI 60

Query: 312 CKI 320
            K+
Sbjct: 61  IKL 63