BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028349
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containi...   243   1e-62
ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containi...   236   1e-60
ref|XP_002532856.1| pentatricopeptide repeat-containing protein,...   233   2e-59
ref|XP_002314181.1| predicted protein [Populus trichocarpa] gi|2...   232   2e-59
ref|XP_002443909.1| hypothetical protein SORBIDRAFT_07g004200 [S...   230   9e-59

>ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial-like [Cucumis sativus]
           gi|449517541|ref|XP_004165804.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial-like [Cucumis sativus]
          Length = 527

 Score =  243 bits (621), Expect = 1e-62
 Identities = 114/160 (71%), Positives = 146/160 (91%), Gaps = 1/160 (0%)
 Frame = -1

Query: 540 EHFNSILSVYCRHGLMDKATNVFKEMEANGCKPNAITYRHLTLGCLKAGLVEEALKTLEV 361
           + FNSILSVYCRHGL+ KAT +F+++EANGCKPNAIT+RHL  GCLKAGLVEEALKTL++
Sbjct: 368 DQFNSILSVYCRHGLIKKATEIFRKIEANGCKPNAITFRHLAFGCLKAGLVEEALKTLDL 427

Query: 360 GMDQITTSN-VKRSTPWLETTLLIVEMFADRGDLENTKKLFAELKEARYTRYTFVYNTLI 184
           G +  +++  V++STPWLETTL ++E+ A+RGD+ENT+KLF ELKEA+YTRYTFVYNTLI
Sbjct: 428 GSNTTSSTKIVRKSTPWLETTLSMIEILAERGDIENTEKLFKELKEAKYTRYTFVYNTLI 487

Query: 183 KAHVKAKVYDSDLLKRMILGGARPDAETYSLIKLAEQFQA 64
           KA+VKAK+++ +LL+RMI+GGARPD+ETYSLIKL+EQFQ+
Sbjct: 488 KAYVKAKIHNPNLLRRMIVGGARPDSETYSLIKLSEQFQS 527


>ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial [Vitis vinifera]
          Length = 550

 Score =  236 bits (603), Expect = 1e-60
 Identities = 113/158 (71%), Positives = 137/158 (86%)
 Frame = -1

Query: 540 EHFNSILSVYCRHGLMDKATNVFKEMEANGCKPNAITYRHLTLGCLKAGLVEEALKTLEV 361
           E FNS++SVY +HG +DKA+ +F+EME NGCK NAITYR+L LGCLKAGL+EEALKTLE+
Sbjct: 392 EQFNSMISVYSKHGFIDKASGLFREMEMNGCKANAITYRNLALGCLKAGLLEEALKTLEL 451

Query: 360 GMDQITTSNVKRSTPWLETTLLIVEMFADRGDLENTKKLFAELKEARYTRYTFVYNTLIK 181
           G     ++ +++S PWLETTL IVE+F++ GD+EN +KLF ELK A YTRYTFVYNTLIK
Sbjct: 452 GKGLTISTRIRKSIPWLETTLSIVEIFSENGDVENAEKLFEELKTANYTRYTFVYNTLIK 511

Query: 180 AHVKAKVYDSDLLKRMILGGARPDAETYSLIKLAEQFQ 67
           A+VKAKVYD +LL+RMILGGARPDAETYSL+KLAEQFQ
Sbjct: 512 AYVKAKVYDPNLLRRMILGGARPDAETYSLMKLAEQFQ 549


>ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527393|gb|EEF29534.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 521

 Score =  233 bits (593), Expect = 2e-59
 Identities = 112/157 (71%), Positives = 134/157 (85%)
 Frame = -1

Query: 540 EHFNSILSVYCRHGLMDKATNVFKEMEANGCKPNAITYRHLTLGCLKAGLVEEALKTLEV 361
           E FNS+LS+YC+ GL+ KAT++F+EM+ NGCKPNAIT+RHL LGCLKA LVEEALKTLE+
Sbjct: 363 EQFNSMLSIYCKCGLVKKATDIFREMDRNGCKPNAITFRHLALGCLKAELVEEALKTLEM 422

Query: 360 GMDQITTSNVKRSTPWLETTLLIVEMFADRGDLENTKKLFAELKEARYTRYTFVYNTLIK 181
           GMD  T++ +K S PWLETT  IVE+FA++GD+ N +K F EL +A+Y RYTFVYNTLIK
Sbjct: 423 GMDFTTSNKIKNSIPWLETTFSIVEIFAEKGDVANAEKFFEELHKAKYARYTFVYNTLIK 482

Query: 180 AHVKAKVYDSDLLKRMILGGARPDAETYSLIKLAEQF 70
           A+VKAKVY   LL+RMILGGARPDAETYSLIKL EQF
Sbjct: 483 AYVKAKVYVPYLLRRMILGGARPDAETYSLIKLIEQF 519


>ref|XP_002314181.1| predicted protein [Populus trichocarpa] gi|222850589|gb|EEE88136.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  232 bits (592), Expect = 2e-59
 Identities = 111/158 (70%), Positives = 136/158 (86%)
 Frame = -1

Query: 540 EHFNSILSVYCRHGLMDKATNVFKEMEANGCKPNAITYRHLTLGCLKAGLVEEALKTLEV 361
           E FNS+LSVYC+HGL+ KAT  F+EME NGCK N+IT+RHL LGCLKA LVEEALKTLE+
Sbjct: 367 EQFNSMLSVYCKHGLIKKATGNFREMEINGCKANSITFRHLALGCLKANLVEEALKTLEM 426

Query: 360 GMDQITTSNVKRSTPWLETTLLIVEMFADRGDLENTKKLFAELKEARYTRYTFVYNTLIK 181
           G +  T++ VK STPWLETTL I+E+FA++GD+ N +KLF EL +A+Y R+TFV+N LIK
Sbjct: 427 GKNLTTSNRVKNSTPWLETTLSIIELFAEKGDVVNVEKLFEELAKAKYIRHTFVFNILIK 486

Query: 180 AHVKAKVYDSDLLKRMILGGARPDAETYSLIKLAEQFQ 67
           A+VKAK+Y  +LL+RMILGGARPDAETYSLIKLAEQF+
Sbjct: 487 AYVKAKIYSPNLLRRMILGGARPDAETYSLIKLAEQFR 524


>ref|XP_002443909.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
           gi|241940259|gb|EES13404.1| hypothetical protein
           SORBIDRAFT_07g004200 [Sorghum bicolor]
          Length = 521

 Score =  230 bits (587), Expect = 9e-59
 Identities = 107/158 (67%), Positives = 137/158 (86%)
 Frame = -1

Query: 540 EHFNSILSVYCRHGLMDKATNVFKEMEANGCKPNAITYRHLTLGCLKAGLVEEALKTLEV 361
           E FNSILSVYCRHG++DKA++VFKEM ANGC+PNAITYRHL LGCLK+GLV+EAL T+++
Sbjct: 363 EQFNSILSVYCRHGVVDKASSVFKEMRANGCQPNAITYRHLALGCLKSGLVKEALNTIDM 422

Query: 360 GMDQITTSNVKRSTPWLETTLLIVEMFADRGDLENTKKLFAELKEARYTRYTFVYNTLIK 181
           G  ++ T  V+ STPWLETT L++E FA+ GDLEN K+L++EL E++Y+R +FVYNTL+K
Sbjct: 423 GKKEVVTKKVRSSTPWLETTHLLLENFAEIGDLENAKRLYSELNESKYSRNSFVYNTLLK 482

Query: 180 AHVKAKVYDSDLLKRMILGGARPDAETYSLIKLAEQFQ 67
           A+VKAKVY+ DLL+ MIL GA PDAETYSL++L EQF+
Sbjct: 483 AYVKAKVYEPDLLRTMILRGAMPDAETYSLLRLIEQFK 520