BLASTX nr result

ID: Cimicifuga21_contig00028346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028346
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631409.1| PREDICTED: uncharacterized protein LOC100853...    65   6e-09
ref|XP_002298970.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_002318456.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002298969.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002317666.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>ref|XP_003631409.1| PREDICTED: uncharacterized protein LOC100853997 [Vitis vinifera]
          Length = 75

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/80 (45%), Positives = 46/80 (57%)
 Frame = +3

Query: 3   FSSFDAVCAEYLGQKVGFGSSAGNNAFCSSSVKNKEANNSEADRKERSSGPSAAQASRKR 182
           FSSFDAVC E+L QK+     +GN          K  +    ++    S P++    RK 
Sbjct: 5   FSSFDAVCFEFLSQKLKSSLPSGN----------KMESQQSTEKLGNPSPPASVGKPRKE 54

Query: 183 RVPRFAVELDGLNCFETVVS 242
           RVPRFA ELDGL+CFET+VS
Sbjct: 55  RVPRFAPELDGLHCFETLVS 74


>ref|XP_002298970.1| predicted protein [Populus trichocarpa] gi|222846228|gb|EEE83775.1|
           predicted protein [Populus trichocarpa]
          Length = 89

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 42/86 (48%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
 Frame = +3

Query: 3   FSSFDAVCAEYLGQKVGFGSSAGNNAFCSSSVKNKEANNSEADR------KERSSGPSAA 164
           FSSFDA+CAE LGQKV   S A     C++       +NSE         +E SS  S A
Sbjct: 5   FSSFDALCAELLGQKVR-SSLALTTMDCNTKRVLTAGDNSEVGEDKLIKNREGSSSRSLA 63

Query: 165 QASRKRRVPRFAVELDGLNCFETVVS 242
           +   K+ VPRFA ELDGLNCFET+V+
Sbjct: 64  RKQEKK-VPRFAPELDGLNCFETIVN 88


>ref|XP_002318456.1| predicted protein [Populus trichocarpa] gi|222859129|gb|EEE96676.1|
           predicted protein [Populus trichocarpa]
          Length = 93

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
 Frame = +3

Query: 3   FSSFDAVCAEYLGQKVGFGSSA---GNNAFCSSSVKNKEANNSEADRKERS---SGP--- 155
           FSSFDA+CAE L QK+ F SSA   GN+     S+KN+E +    D+   S   S P   
Sbjct: 5   FSSFDALCAESLVQKLRFSSSASKEGNSQPQVESMKNREMSEGSDDKSSTSLSKSSPVNI 64

Query: 156 SAAQASRKRRVPRFAVELDGLNCFETVVS 242
           S     +KRR+ RFA ELDG++CFET+++
Sbjct: 65  SKPLQQQKRRI-RFAPELDGVHCFETMIT 92


>ref|XP_002298969.1| predicted protein [Populus trichocarpa]
           gi|224147080|ref|XP_002336403.1| predicted protein
           [Populus trichocarpa] gi|222834911|gb|EEE73360.1|
           predicted protein [Populus trichocarpa]
           gi|222846227|gb|EEE83774.1| predicted protein [Populus
           trichocarpa]
          Length = 89

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
 Frame = +3

Query: 3   FSSFDAVCAEYLGQKVGFGSSAGNNAFCSSSVKNKEANNSEADRK--ERSSGPSAAQASR 176
           FSSFDA+CAE LGQKV    +       +  V     N+  A+ K  +   G S+   +R
Sbjct: 5   FSSFDALCAELLGQKVRSSLALTTMDCNTKRVLTAGDNSMVAEDKLIKNREGSSSRSLAR 64

Query: 177 K--RRVPRFAVELDGLNCFETVVS 242
           K  ++VPRFA ELDGLNCFET+V+
Sbjct: 65  KQEKKVPRFAPELDGLNCFETIVN 88


>ref|XP_002317666.1| predicted protein [Populus trichocarpa] gi|222860731|gb|EEE98278.1|
           predicted protein [Populus trichocarpa]
          Length = 85

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
 Frame = +3

Query: 3   FSSFDAVCAEYLGQKV----GFGSSAGNNAFCSSSVKNKEANNSEADRKERSSGPSAAQA 170
           FSSFDA+C E+L QKV     F +  GN    +  V +++    +  + ++ S   +   
Sbjct: 5   FSSFDALCNEFLSQKVKSSFAFTTMDGN----TKRVLSRKVAEDKLIKNQQGSSSRSLTR 60

Query: 171 SRKRRVPRFAVELDGLNCFETVVS 242
            +++++ RFA+ELDGLNCFET+V+
Sbjct: 61  KQEKKMTRFALELDGLNCFETIVN 84


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