BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028336
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37
ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23
emb|CBI20254.3| unnamed protein product [Vitis vinifera]              108   3e-22
ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21

>ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  160 bits (404), Expect = 1e-37
 Identities = 79/128 (61%), Positives = 102/128 (79%)
 Frame = +2

Query: 14  MLRQNVSPDNSTFRMILRASAASLSANKLGDAFHCQIIKLGFEFNLFLQTGLLNFHAKVG 193
           MLR +V P  ++F +ILR+ A S  A +LG+AFHCQI+K+GFE+++ LQTGLL+F+AKVG
Sbjct: 1   MLRNDVLPSKTSFSLILRSCAISGEA-QLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVG 59

Query: 194 NLDSAKRVFDEMSKRDAVAHNVMIAALSKHGCVTDARKLFDEMPVRNSFSWNSMISCYCR 373
           +L  AKRVF  M +RD VA+N MI+ALSKHG V +AR LFD M  RNS SWNSMI+CYC+
Sbjct: 60  DLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCK 119

Query: 374 VGDIQTAR 397
           +GDI +AR
Sbjct: 120 LGDINSAR 127


>ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Cucumis sativus]
          Length = 697

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/131 (45%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
 Frame = +2

Query: 5   YNSMLRQ-NVSPDNSTFRMILRASAASLSANKLGDAFHCQIIKLGFEFNLFLQTGLLNFH 181
           Y  ML + NV P + TF  +++A    + A +LG   HC I K GFE +LF+QT L++F+
Sbjct: 222 YVHMLEESNVLPTSYTFSSLVKA-CTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFY 280

Query: 182 AKVGNLDSAKRVFDEMSKRDAVAHNVMIAALSKHGCVTDARKLFDEMPVRNSFSWNSMIS 361
           +K+  L  A++VFDEM +RDA A   M++AL++ G +  ARKLF+EMP RN+ +WN+MI 
Sbjct: 281 SKLEILSEARKVFDEMCERDAFAWTAMVSALARVGDMDSARKLFEEMPERNTATWNTMID 340

Query: 362 CYCRVGDIQTA 394
            Y R+G++++A
Sbjct: 341 GYARLGNVESA 351


>ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Cucumis sativus]
          Length = 600

 Score =  113 bits (282), Expect = 2e-23
 Identities = 59/131 (45%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
 Frame = +2

Query: 5   YNSMLRQ-NVSPDNSTFRMILRASAASLSANKLGDAFHCQIIKLGFEFNLFLQTGLLNFH 181
           Y  ML + NV P + TF  +++A    + A +LG   HC I K GFE +LF+QT L++F+
Sbjct: 125 YVHMLEESNVLPTSYTFSSLVKA-CTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFY 183

Query: 182 AKVGNLDSAKRVFDEMSKRDAVAHNVMIAALSKHGCVTDARKLFDEMPVRNSFSWNSMIS 361
           +K+  L  A++VFDEM +RDA A   M++AL++ G +  ARKLF+EMP RN+ +WN+MI 
Sbjct: 184 SKLEILSEARKVFDEMCERDAFAWTAMLSALARVGDMDSARKLFEEMPERNTATWNTMID 243

Query: 362 CYCRVGDIQTA 394
            Y R+G++++A
Sbjct: 244 GYTRLGNVESA 254


>emb|CBI20254.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  108 bits (271), Expect = 3e-22
 Identities = 55/130 (42%), Positives = 87/130 (66%)
 Frame = +2

Query: 5   YNSMLRQNVSPDNSTFRMILRASAASLSANKLGDAFHCQIIKLGFEFNLFLQTGLLNFHA 184
           Y  M++  VSP + TF  +++A +  +S    G+A H  I K GF+ ++F+QT L++F+ 
Sbjct: 98  YLDMVQAQVSPTSFTFSSLVKACSL-VSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYG 156

Query: 185 KVGNLDSAKRVFDEMSKRDAVAHNVMIAALSKHGCVTDARKLFDEMPVRNSFSWNSMISC 364
             G +  A+RVFDEMS+RD  A   MI+  ++ G ++ AR+LFDEMPVRN+ SWN+MI  
Sbjct: 157 NAGKIVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDG 216

Query: 365 YCRVGDIQTA 394
           Y R+ ++++A
Sbjct: 217 YSRLRNVESA 226


>ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Vitis vinifera]
          Length = 464

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/127 (42%), Positives = 86/127 (67%)
 Frame = +2

Query: 14  MLRQNVSPDNSTFRMILRASAASLSANKLGDAFHCQIIKLGFEFNLFLQTGLLNFHAKVG 193
           M++  VSP + TF  +++A +  +S    G+A H  I K GF+ ++F+QT L++F+   G
Sbjct: 1   MVQAQVSPTSFTFSSLVKACSL-VSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAG 59

Query: 194 NLDSAKRVFDEMSKRDAVAHNVMIAALSKHGCVTDARKLFDEMPVRNSFSWNSMISCYCR 373
            +  A+RVFDEMS+RD  A   MI+  ++ G ++ AR+LFDEMPVRN+ SWN+MI  Y R
Sbjct: 60  KIVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSR 119

Query: 374 VGDIQTA 394
           + ++++A
Sbjct: 120 LRNVESA 126