BLASTX nr result

ID: Cimicifuga21_contig00028321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028321
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   218   3e-55
ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial pro...   218   3e-55
ref|NP_174294.1| Intron maturase, type II-like protein [Arabidop...   213   1e-53
ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial pro...   213   1e-53
ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial pro...   211   4e-53

>ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 697

 Score =  218 bits (556), Expect = 3e-55
 Identities = 98/115 (85%), Positives = 106/115 (92%)
 Frame = -1

Query: 347 PKPDPYWLRTFFSFAPMEAAMVPSYGHCGILSPLLANVCLTEFDNWMEDKIVKYFCPSKL 168
           PKPDPYWLRTFF+FAP EAA VPSYGHCGILSPLLAN+CL E D  MEDKIV+YF PSKL
Sbjct: 302 PKPDPYWLRTFFNFAPEEAAKVPSYGHCGILSPLLANICLHELDLVMEDKIVEYFRPSKL 361

Query: 167 DSIWKNSITDGCHNPAWPEFVPSSGREKTRKMDYIRYGGHFLIGVRGPREDAVEI 3
           DSIWK+SI DGCHNPAWPEFVP+SG+EKTRKMDYIRYGGHFL+G+RGPREDAV I
Sbjct: 362 DSIWKDSINDGCHNPAWPEFVPASGKEKTRKMDYIRYGGHFLVGIRGPREDAVRI 416


>ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Cucumis sativus]
          Length = 697

 Score =  218 bits (556), Expect = 3e-55
 Identities = 98/115 (85%), Positives = 106/115 (92%)
 Frame = -1

Query: 347 PKPDPYWLRTFFSFAPMEAAMVPSYGHCGILSPLLANVCLTEFDNWMEDKIVKYFCPSKL 168
           PKPDPYWLRTFF+FAP EAA VPSYGHCGILSPLLAN+CL E D  MEDKIV+YF PSKL
Sbjct: 302 PKPDPYWLRTFFNFAPEEAAKVPSYGHCGILSPLLANICLHELDLVMEDKIVEYFRPSKL 361

Query: 167 DSIWKNSITDGCHNPAWPEFVPSSGREKTRKMDYIRYGGHFLIGVRGPREDAVEI 3
           DSIWK+SI DGCHNPAWPEFVP+SG+EKTRKMDYIRYGGHFL+G+RGPREDAV I
Sbjct: 362 DSIWKDSINDGCHNPAWPEFVPASGKEKTRKMDYIRYGGHFLVGIRGPREDAVRI 416


>ref|NP_174294.1| Intron maturase, type II-like protein [Arabidopsis thaliana]
           gi|12324175|gb|AAG52062.1|AC022455_16 unknown protein;
           35070-37205 [Arabidopsis thaliana]
           gi|332193046|gb|AEE31167.1| Intron maturase, type
           II-like protein [Arabidopsis thaliana]
          Length = 711

 Score =  213 bits (542), Expect = 1e-53
 Identities = 95/115 (82%), Positives = 104/115 (90%)
 Frame = -1

Query: 347 PKPDPYWLRTFFSFAPMEAAMVPSYGHCGILSPLLANVCLTEFDNWMEDKIVKYFCPSKL 168
           PKPDPYWLRTF+SFAP EAA VPSYG+CG+LSPLLANVCL E D +ME KIV+YF P K 
Sbjct: 308 PKPDPYWLRTFYSFAPKEAAKVPSYGYCGVLSPLLANVCLNELDRFMETKIVEYFSPCKD 367

Query: 167 DSIWKNSITDGCHNPAWPEFVPSSGREKTRKMDYIRYGGHFLIGVRGPREDAVEI 3
           DSIWK SI DGCHNPAWPEFVPSSG+EKTRKMDYIRYGGHFLIG+RGPREDAV++
Sbjct: 368 DSIWKESIEDGCHNPAWPEFVPSSGKEKTRKMDYIRYGGHFLIGIRGPREDAVKM 422


>ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Glycine max]
          Length = 686

 Score =  213 bits (542), Expect = 1e-53
 Identities = 93/115 (80%), Positives = 103/115 (89%)
 Frame = -1

Query: 347 PKPDPYWLRTFFSFAPMEAAMVPSYGHCGILSPLLANVCLTEFDNWMEDKIVKYFCPSKL 168
           P PDPYWLRTFFSFAP EAA +P YGHCGILSPLLANVCL E D+WME+KIV++F P   
Sbjct: 285 PIPDPYWLRTFFSFAPEEAAKLPDYGHCGILSPLLANVCLNELDHWMEEKIVEFFRPCAF 344

Query: 167 DSIWKNSITDGCHNPAWPEFVPSSGREKTRKMDYIRYGGHFLIGVRGPREDAVEI 3
           DSIWK+SI DGCHNPAWPEFVPSSGREKTRKMDY+R+GGHFLIG+RGPREDA E+
Sbjct: 345 DSIWKHSIDDGCHNPAWPEFVPSSGREKTRKMDYVRFGGHFLIGIRGPREDAAEL 399


>ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 689

 Score =  211 bits (538), Expect = 4e-53
 Identities = 95/115 (82%), Positives = 106/115 (92%)
 Frame = -1

Query: 347 PKPDPYWLRTFFSFAPMEAAMVPSYGHCGILSPLLANVCLTEFDNWMEDKIVKYFCPSKL 168
           PKPDP+WLR+FFSFAP EAA VPSYGHCGILSPLLANVCL+E D  ME+KI+K+F PSKL
Sbjct: 286 PKPDPFWLRSFFSFAPEEAAKVPSYGHCGILSPLLANVCLSELDYMMEEKIIKFFRPSKL 345

Query: 167 DSIWKNSITDGCHNPAWPEFVPSSGREKTRKMDYIRYGGHFLIGVRGPREDAVEI 3
           DSIW++SI DG HNPAWPEFVPSS REKTRKMDYIRYGGHFLIG+RGPRE+AV+I
Sbjct: 346 DSIWRDSINDGSHNPAWPEFVPSSDREKTRKMDYIRYGGHFLIGIRGPREEAVQI 400


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