BLASTX nr result

ID: Cimicifuga21_contig00028314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028314
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002337272.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002337272.1| predicted protein [Populus trichocarpa] gi|222838663|gb|EEE77028.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
 Frame = -2

Query: 415 PPPLGTAKLNVDGSVVA--DRQGIGGLVRNHKGEVLFA-----------LQELRAIEGLI 275
           PP + + K NVDGS +   D  GIGG++RNH G +L             + ELRAI   I
Sbjct: 4   PPMINSLKWNVDGSSLGKPDPSGIGGVLRNHHGHLLGMFSVPVGILDSNIAELRAIVKAI 63

Query: 274 TCYENEL----RRVLVATDSLRAVQILLKKEEPPWYCKNMVASIRDKAMKLEEVRIMHVF 107
               +      + +++ +DS+ A+  + K    PW   N+ +S+         +   H+F
Sbjct: 64  ELLASNCLFHHQHLIIESDSVNAISWMNKPHSRPWKHHNLFSSVNRLKAYFGSITFSHIF 123

Query: 106 RE 101
           RE
Sbjct: 124 RE 125


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