BLASTX nr result

ID: Cimicifuga21_contig00028296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028296
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301894.1| predicted protein [Populus trichocarpa] gi|2...   213   1e-53
ref|XP_002890416.1| auxin efflux carrier family protein [Arabido...   213   2e-53
ref|NP_683316.2| auxin efflux carrier-like protein [Arabidopsis ...   212   3e-53
ref|XP_003547889.1| PREDICTED: uncharacterized protein LOC100817...   207   9e-52
ref|XP_003534224.1| PREDICTED: uncharacterized protein LOC100810...   202   3e-50

>ref|XP_002301894.1| predicted protein [Populus trichocarpa] gi|222843620|gb|EEE81167.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score =  213 bits (543), Expect = 1e-53
 Identities = 94/140 (67%), Positives = 123/140 (87%)
 Frame = +2

Query: 98  MGLLDLFTAASIPVLKFLLVTVLGAFLAIDRINILGEDARKHLNKVVFYVFSPALIATNL 277
           MGLLDL  A+SIPVLK LL+T +G++LA+D +++LGEDARKH+N VVFYVF+PAL+++NL
Sbjct: 1   MGLLDLLIASSIPVLKVLLITAIGSYLALDHVDVLGEDARKHVNNVVFYVFNPALVSSNL 60

Query: 278 AETITFESMVKLWFMPLNILITYVIGSALGWIVIKMSSAPSHLKGVILGCCSAGNLGSML 457
           AETIT++SM K+WFMP NILIT+VI S LGW V++ +  PSHL G+I+GCC+AGNLG+M 
Sbjct: 61  AETITYDSMKKMWFMPFNILITFVISSLLGWFVVQFTRPPSHLHGLIVGCCAAGNLGNMF 120

Query: 458 LVIIPAICREKGSPFGDPDV 517
           L++IPAIC+EKGSPFG PD+
Sbjct: 121 LIMIPAICKEKGSPFGSPDI 140


>ref|XP_002890416.1| auxin efflux carrier family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297336258|gb|EFH66675.1| auxin efflux carrier
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 386

 Score =  213 bits (541), Expect = 2e-53
 Identities = 95/139 (68%), Positives = 124/139 (89%)
 Frame = +2

Query: 98  MGLLDLFTAASIPVLKFLLVTVLGAFLAIDRINILGEDARKHLNKVVFYVFSPALIATNL 277
           M LLDLF  +SIPV K LL+T +G +LA+D++NIL +DARK LN +VFYVFSP+L+A++L
Sbjct: 3   MRLLDLFITSSIPVAKILLITGIGFYLALDQVNILNQDARKQLNNIVFYVFSPSLVASSL 62

Query: 278 AETITFESMVKLWFMPLNILITYVIGSALGWIVIKMSSAPSHLKGVILGCCSAGNLGSML 457
           +ETIT+ESMVK+WFMPLN+L+T++IGS LGWIVIK++  PSHL+G+I+GCC+AGNLG+M 
Sbjct: 63  SETITYESMVKMWFMPLNVLLTFIIGSFLGWIVIKITKPPSHLRGIIVGCCAAGNLGNMP 122

Query: 458 LVIIPAICREKGSPFGDPD 514
           L+IIPAIC EKGSPFGDP+
Sbjct: 123 LIIIPAICNEKGSPFGDPE 141


>ref|NP_683316.2| auxin efflux carrier-like protein [Arabidopsis thaliana]
           gi|332191921|gb|AEE30042.1| auxin efflux carrier-like
           protein [Arabidopsis thaliana]
          Length = 472

 Score =  212 bits (539), Expect = 3e-53
 Identities = 95/139 (68%), Positives = 123/139 (88%)
 Frame = +2

Query: 98  MGLLDLFTAASIPVLKFLLVTVLGAFLAIDRINILGEDARKHLNKVVFYVFSPALIATNL 277
           M LLDLF  +SIPV K LL+T +G +LA+D++NIL  DARK LN +VFYVFSP+L+A++L
Sbjct: 89  MRLLDLFITSSIPVAKILLITGIGFYLALDQVNILNHDARKQLNNIVFYVFSPSLVASSL 148

Query: 278 AETITFESMVKLWFMPLNILITYVIGSALGWIVIKMSSAPSHLKGVILGCCSAGNLGSML 457
           +ETIT+ESMVK+WFMPLN+L+T++IGS LGWIVIK++  PSHL+G+I+GCC+AGNLG+M 
Sbjct: 149 SETITYESMVKMWFMPLNVLLTFIIGSFLGWIVIKITKPPSHLRGIIVGCCAAGNLGNMP 208

Query: 458 LVIIPAICREKGSPFGDPD 514
           L+IIPAIC EKGSPFGDP+
Sbjct: 209 LIIIPAICNEKGSPFGDPE 227


>ref|XP_003547889.1| PREDICTED: uncharacterized protein LOC100817605 [Glycine max]
          Length = 417

 Score =  207 bits (526), Expect = 9e-52
 Identities = 93/140 (66%), Positives = 123/140 (87%)
 Frame = +2

Query: 98  MGLLDLFTAASIPVLKFLLVTVLGAFLAIDRINILGEDARKHLNKVVFYVFSPALIATNL 277
           MG + L + AS PV+K LLVT +G FLA+D I+ILGED+RK +N++VFYVF+P+L+ +NL
Sbjct: 1   MGFIQLLSVASFPVIKVLLVTAIGLFLALDDISILGEDSRKKVNQLVFYVFNPSLVGSNL 60

Query: 278 AETITFESMVKLWFMPLNILITYVIGSALGWIVIKMSSAPSHLKGVILGCCSAGNLGSML 457
           A+TITFES+V+LWFMPLNIL T+++GSALGWI+IKM+  P H++G+ILGCCSAGNLG++L
Sbjct: 61  AKTITFESIVQLWFMPLNILCTFILGSALGWILIKMTRPPKHMEGLILGCCSAGNLGNLL 120

Query: 458 LVIIPAICREKGSPFGDPDV 517
           +VIIPAIC+E G+PFGD DV
Sbjct: 121 IVIIPAICKESGNPFGDSDV 140


>ref|XP_003534224.1| PREDICTED: uncharacterized protein LOC100810166 [Glycine max]
          Length = 414

 Score =  202 bits (513), Expect = 3e-50
 Identities = 90/140 (64%), Positives = 123/140 (87%)
 Frame = +2

Query: 98  MGLLDLFTAASIPVLKFLLVTVLGAFLAIDRINILGEDARKHLNKVVFYVFSPALIATNL 277
           MG + LF+ AS PV+K LL+T LG FLA+D I+ILGEDARK +N++VFYVF+P+L+ +NL
Sbjct: 1   MGFIKLFSVASFPVIKVLLITALGLFLALDNISILGEDARKKVNQLVFYVFNPSLVGSNL 60

Query: 278 AETITFESMVKLWFMPLNILITYVIGSALGWIVIKMSSAPSHLKGVILGCCSAGNLGSML 457
           A+TITFES+VKLWFMP+NIL T+++GSALGWI+IKM+  P  ++G+ILGCCSAGNLG++ 
Sbjct: 61  AKTITFESVVKLWFMPVNILGTFILGSALGWILIKMTRPPKRMEGLILGCCSAGNLGNLP 120

Query: 458 LVIIPAICREKGSPFGDPDV 517
           ++II AIC+++GSPFG+PD+
Sbjct: 121 MIIIAAICKQEGSPFGEPDL 140


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