BLASTX nr result

ID: Cimicifuga21_contig00028293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028293
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310366.1| methylenetetrahydrofolate reductase [Populus...   114   8e-24
ref|XP_002529223.1| methylenetetrahydrofolate reductase, putativ...   113   1e-23
ref|XP_002331635.1| methylenetetrahydrofolate reductase [Populus...   112   4e-23
gb|ABR16220.1| unknown [Picea sitchensis]                             111   5e-23
ref|XP_003523478.1| PREDICTED: methylenetetrahydrofolate reducta...   111   7e-23

>ref|XP_002310366.1| methylenetetrahydrofolate reductase [Populus trichocarpa]
           gi|222853269|gb|EEE90816.1| methylenetetrahydrofolate
           reductase [Populus trichocarpa]
          Length = 608

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/76 (68%), Positives = 63/76 (82%)
 Frame = +3

Query: 3   ISCPILPGILPINNYDQFWRLTQFCKIRVPTKVAETLELIKHDEEAVRKYGIDLGTEMCR 182
           I+CPI+PGI+PINNY  F R+T FCK ++P +V   LE IK +EEAVR YGI LGTEMC+
Sbjct: 227 ITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEVTAALEPIKDNEEAVRAYGIHLGTEMCK 286

Query: 183 EILAHGIKTLHLFTLN 230
           +ILAHGIKTLHL+TLN
Sbjct: 287 KILAHGIKTLHLYTLN 302


>ref|XP_002529223.1| methylenetetrahydrofolate reductase, putative [Ricinus communis]
           gi|223531341|gb|EEF33179.1| methylenetetrahydrofolate
           reductase, putative [Ricinus communis]
          Length = 609

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/76 (67%), Positives = 63/76 (82%)
 Frame = +3

Query: 3   ISCPILPGILPINNYDQFWRLTQFCKIRVPTKVAETLELIKHDEEAVRKYGIDLGTEMCR 182
           I+CPI+PGI+PINNY  F R+T FCK ++P +V   LE IK +EEAVR YGI LGTEMC+
Sbjct: 228 INCPIVPGIMPINNYKGFLRMTGFCKTKIPAEVTAALEPIKDNEEAVRAYGIHLGTEMCK 287

Query: 183 EILAHGIKTLHLFTLN 230
           +I+AHGIKTLHL+TLN
Sbjct: 288 KIMAHGIKTLHLYTLN 303


>ref|XP_002331635.1| methylenetetrahydrofolate reductase [Populus trichocarpa]
           gi|222874031|gb|EEF11162.1| methylenetetrahydrofolate
           reductase [Populus trichocarpa]
          Length = 606

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/76 (67%), Positives = 62/76 (81%)
 Frame = +3

Query: 3   ISCPILPGILPINNYDQFWRLTQFCKIRVPTKVAETLELIKHDEEAVRKYGIDLGTEMCR 182
           I+CPI+PGI+PINNY  F R+  FCK ++P +V   LE IK +EEAVR YGI LGTEMC+
Sbjct: 224 INCPIVPGIMPINNYKGFIRMAGFCKTKIPAEVTAALEPIKDNEEAVRAYGIHLGTEMCK 283

Query: 183 EILAHGIKTLHLFTLN 230
           +ILAHGIKTLHL+TLN
Sbjct: 284 KILAHGIKTLHLYTLN 299


>gb|ABR16220.1| unknown [Picea sitchensis]
          Length = 594

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/76 (65%), Positives = 62/76 (81%)
 Frame = +3

Query: 3   ISCPILPGILPINNYDQFWRLTQFCKIRVPTKVAETLELIKHDEEAVRKYGIDLGTEMCR 182
           I CPI+PGI+PINNY  F R+  FCK ++P+++   LE IK +EEAVR YGI LGTEMC+
Sbjct: 213 IKCPIVPGIMPINNYKGFIRMAGFCKTKIPSEITAALEPIKDNEEAVRAYGIHLGTEMCK 272

Query: 183 EILAHGIKTLHLFTLN 230
           +ILAHGIKTLHL+TLN
Sbjct: 273 KILAHGIKTLHLYTLN 288


>ref|XP_003523478.1| PREDICTED: methylenetetrahydrofolate reductase 2-like [Glycine max]
          Length = 595

 Score =  111 bits (277), Expect = 7e-23
 Identities = 50/76 (65%), Positives = 62/76 (81%)
 Frame = +3

Query: 3   ISCPILPGILPINNYDQFWRLTQFCKIRVPTKVAETLELIKHDEEAVRKYGIDLGTEMCR 182
           I+CPI+PGI+PINNY  F R+T FCK ++P  +   LE IK +EEAV+ YGI LGTEMC+
Sbjct: 214 ITCPIVPGIMPINNYKGFIRMTGFCKTKIPADIMAALEPIKDNEEAVKAYGIHLGTEMCK 273

Query: 183 EILAHGIKTLHLFTLN 230
           +ILAHGIKTLHL+TLN
Sbjct: 274 KILAHGIKTLHLYTLN 289


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