BLASTX nr result

ID: Cimicifuga21_contig00028275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028275
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20600.3| unnamed protein product [Vitis vinifera]              227   7e-58
ref|XP_003523757.1| PREDICTED: uncharacterized protein LOC100783...   219   1e-55
ref|XP_003527855.1| PREDICTED: uncharacterized protein LOC100783...   214   4e-54
ref|NP_001154282.2| tetratricopeptide repeat domain-containing p...   197   6e-49
ref|NP_195008.6| tetratricopeptide repeat domain-containing prot...   197   6e-49

>emb|CBI20600.3| unnamed protein product [Vitis vinifera]
          Length = 1970

 Score =  227 bits (579), Expect = 7e-58
 Identities = 116/135 (85%), Positives = 122/135 (90%), Gaps = 1/135 (0%)
 Frame = +3

Query: 75  KLYSSNMFSIAAINDTDSKGVWEPLAPTKEAQEFHLTQTYHEGLLKLQAKEYAKARELLE 254
           ++  S MFSIAAINDTDSKG WEPLAPTKEAQEFHL+QTYHEGL KLQAKEY KARELLE
Sbjct: 20  RIEDSKMFSIAAINDTDSKGQWEPLAPTKEAQEFHLSQTYHEGLRKLQAKEYEKARELLE 79

Query: 255 AVLRDPLISSAQVDS-ASDDHLLQLRFLALKNLANVFLQQGSMHYESALNCYLQAVEIDT 431
           AVL+DPLIS AQVDS A+D HLLQLRFL LKNLA VFLQQGS HYE AL+CYLQAVEIDT
Sbjct: 80  AVLKDPLISKAQVDSNATDGHLLQLRFLVLKNLATVFLQQGSDHYERALSCYLQAVEIDT 139

Query: 432 KDSVVWNQLGTLSCS 476
           KDSVVWNQLGTLSCS
Sbjct: 140 KDSVVWNQLGTLSCS 154


>ref|XP_003523757.1| PREDICTED: uncharacterized protein LOC100783154 [Glycine max]
          Length = 1941

 Score =  219 bits (559), Expect = 1e-55
 Identities = 111/127 (87%), Positives = 119/127 (93%), Gaps = 1/127 (0%)
 Frame = +3

Query: 96  FSIAAINDTDSKGVWEPLAPTKEAQEFHLTQTYHEGLLKLQAKEYAKARELLEAVLRDPL 275
           FSIAAINDTDSK  WEPLAPTKEAQEFHL+QTYHEGLLKLQAKEY KARELLE+VL+DPL
Sbjct: 9   FSIAAINDTDSKSQWEPLAPTKEAQEFHLSQTYHEGLLKLQAKEYEKARELLESVLKDPL 68

Query: 276 ISSAQVD-SASDDHLLQLRFLALKNLANVFLQQGSMHYESALNCYLQAVEIDTKDSVVWN 452
           I++AQVD SASD HLLQLRFLALKNLA VFLQQGS HYE+AL CYLQAVEID+KDSVVWN
Sbjct: 69  IANAQVDSSASDGHLLQLRFLALKNLAAVFLQQGSTHYENALRCYLQAVEIDSKDSVVWN 128

Query: 453 QLGTLSC 473
           +LGTLSC
Sbjct: 129 RLGTLSC 135


>ref|XP_003527855.1| PREDICTED: uncharacterized protein LOC100783547 [Glycine max]
          Length = 1938

 Score =  214 bits (546), Expect = 4e-54
 Identities = 109/130 (83%), Positives = 118/130 (90%), Gaps = 1/130 (0%)
 Frame = +3

Query: 90  NMFSIAAINDTDSKGVWEPLAPTKEAQEFHLTQTYHEGLLKLQAKEYAKARELLEAVLRD 269
           + FSIAAINDTDSK  WEPLAPTKEAQEFHL+QTYHEGLLKLQ KEY  ARELLE+VL+D
Sbjct: 19  SQFSIAAINDTDSKCQWEPLAPTKEAQEFHLSQTYHEGLLKLQTKEYEMARELLESVLKD 78

Query: 270 PLISSAQVD-SASDDHLLQLRFLALKNLANVFLQQGSMHYESALNCYLQAVEIDTKDSVV 446
           PLI++AQVD SASD HLLQLRFLALKNLA VFLQQ S HYE+AL CYLQAVEID+KDSVV
Sbjct: 79  PLIANAQVDSSASDGHLLQLRFLALKNLATVFLQQDSTHYENALRCYLQAVEIDSKDSVV 138

Query: 447 WNQLGTLSCS 476
           WN+LGTLSCS
Sbjct: 139 WNRLGTLSCS 148


>ref|NP_001154282.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana] gi|332660723|gb|AEE86123.1| tetratricopeptide
           repeat domain-containing protein [Arabidopsis thaliana]
          Length = 1872

 Score =  197 bits (502), Expect = 6e-49
 Identities = 94/129 (72%), Positives = 117/129 (90%), Gaps = 1/129 (0%)
 Frame = +3

Query: 93  MFSIAAINDTDSKGVWEPLAPTKEAQEFHLTQTYHEGLLKLQAKEYAKARELLEAVLRDP 272
           MFSIAAINDT+S   WEPLAP+KEAQEFHL+QTYH+GLLKLQAK+Y KARELLE++L+DP
Sbjct: 1   MFSIAAINDTESTEKWEPLAPSKEAQEFHLSQTYHDGLLKLQAKDYDKARELLESILKDP 60

Query: 273 LISSAQVDS-ASDDHLLQLRFLALKNLANVFLQQGSMHYESALNCYLQAVEIDTKDSVVW 449
           +I++++V++ A+D+HL  LRFLALKNLA VFL+ GS HYE+ALNCYLQA+++D KDSV+W
Sbjct: 61  IITNSKVETIANDNHLHHLRFLALKNLATVFLELGSSHYENALNCYLQAIDLDAKDSVLW 120

Query: 450 NQLGTLSCS 476
           N LGTLSCS
Sbjct: 121 NHLGTLSCS 129


>ref|NP_195008.6| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana] gi|332660722|gb|AEE86122.1| tetratricopeptide
           repeat domain-containing protein [Arabidopsis thaliana]
          Length = 1863

 Score =  197 bits (502), Expect = 6e-49
 Identities = 94/129 (72%), Positives = 117/129 (90%), Gaps = 1/129 (0%)
 Frame = +3

Query: 93  MFSIAAINDTDSKGVWEPLAPTKEAQEFHLTQTYHEGLLKLQAKEYAKARELLEAVLRDP 272
           MFSIAAINDT+S   WEPLAP+KEAQEFHL+QTYH+GLLKLQAK+Y KARELLE++L+DP
Sbjct: 1   MFSIAAINDTESTEKWEPLAPSKEAQEFHLSQTYHDGLLKLQAKDYDKARELLESILKDP 60

Query: 273 LISSAQVDS-ASDDHLLQLRFLALKNLANVFLQQGSMHYESALNCYLQAVEIDTKDSVVW 449
           +I++++V++ A+D+HL  LRFLALKNLA VFL+ GS HYE+ALNCYLQA+++D KDSV+W
Sbjct: 61  IITNSKVETIANDNHLHHLRFLALKNLATVFLELGSSHYENALNCYLQAIDLDAKDSVLW 120

Query: 450 NQLGTLSCS 476
           N LGTLSCS
Sbjct: 121 NHLGTLSCS 129


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