BLASTX nr result

ID: Cimicifuga21_contig00028269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028269
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320256.1| predicted protein [Populus trichocarpa] gi|2...   136   3e-30
ref|XP_002273891.2| PREDICTED: uncharacterized protein LOC100255...   135   7e-30
gb|ACU22992.1| unknown [Glycine max]                                  129   5e-28
ref|XP_002515178.1| ribonuclease P, putative [Ricinus communis] ...   126   3e-27
ref|NP_001152178.1| ribonuclease P [Zea mays] gi|195653597|gb|AC...   119   5e-25

>ref|XP_002320256.1| predicted protein [Populus trichocarpa] gi|222861029|gb|EEE98571.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  136 bits (342), Expect = 3e-30
 Identities = 77/119 (64%), Positives = 90/119 (75%)
 Frame = +1

Query: 1   VTRVLERMSPSSVSENSAQDSTLECGGGKDSSVQLQAVLLASDCNPRWLTKHIPILASSR 180
           VTRVLERMSP S S +S Q S       K  SV LQA+L+ASDCNP+WLT+H+P LASSR
Sbjct: 67  VTRVLERMSPVSESGSSLQRSHA-INNHKVPSVHLQAILIASDCNPKWLTRHLPSLASSR 125

Query: 181 NVPLIFVKDKKGGSLRLGELVNLKTAIAIGVKANGSGINKLVAEILESSNSVGDTESCE 357
            VPLIFVKDK+GGSLRLGELV LKTAIAIGVKA G+ IN++V  IL  + +  DT+  E
Sbjct: 126 KVPLIFVKDKRGGSLRLGELVKLKTAIAIGVKARGNAINEIVG-ILCGNETNLDTDKIE 183


>ref|XP_002273891.2| PREDICTED: uncharacterized protein LOC100255449 [Vitis vinifera]
           gi|297744086|emb|CBI37056.3| unnamed protein product
           [Vitis vinifera]
          Length = 196

 Score =  135 bits (339), Expect = 7e-30
 Identities = 77/122 (63%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
 Frame = +1

Query: 1   VTRVLERMSP-SSVSENSAQDSTLECGGGKDSSVQLQAVLLASDCNPRWLTKHIPILASS 177
           VTRVLERM+P S +   SAQ         +  SV+LQAV +ASD NPRWLTKH+P LASS
Sbjct: 67  VTRVLERMTPCSEMGGESAQQPLANPSELQLPSVRLQAVFVASDSNPRWLTKHLPSLASS 126

Query: 178 RNVPLIFVKDKKGGSLRLGELVNLKTAIAIGVKANGSGINKLVAEILESSNSVGDTESCE 357
           R VPLIFVKDKKGGSLRLGELV LKTAIAIG+KA  +GIN+LV EIL        T+  E
Sbjct: 127 RKVPLIFVKDKKGGSLRLGELVKLKTAIAIGIKARENGINQLVEEILHGKEVNLGTDCQE 186

Query: 358 VG 363
           +G
Sbjct: 187 LG 188


>gb|ACU22992.1| unknown [Glycine max]
          Length = 195

 Score =  129 bits (323), Expect = 5e-28
 Identities = 67/107 (62%), Positives = 84/107 (78%)
 Frame = +1

Query: 1   VTRVLERMSPSSVSENSAQDSTLECGGGKDSSVQLQAVLLASDCNPRWLTKHIPILASSR 180
           VTRVLERM P +  E+S +  +L       SSV+LQAVL+ASDCNPRWLTKH+  LASSR
Sbjct: 73  VTRVLERMKPCTELESSTELISLR-SNHTASSVKLQAVLVASDCNPRWLTKHLLSLASSR 131

Query: 181 NVPLIFVKDKKGGSLRLGELVNLKTAIAIGVKANGSGINKLVAEILE 321
           NVPL+FV+D K GSLRLGELV L+TAIAIG+K  GS INK++ ++++
Sbjct: 132 NVPLVFVRDTKQGSLRLGELVQLETAIAIGIKVKGSTINKIIQQVIQ 178


>ref|XP_002515178.1| ribonuclease P, putative [Ricinus communis]
           gi|223545658|gb|EEF47162.1| ribonuclease P, putative
           [Ricinus communis]
          Length = 205

 Score =  126 bits (316), Expect = 3e-27
 Identities = 64/123 (52%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
 Frame = +1

Query: 1   VTRVLERMSPSSVSENSAQ----DSTLECGGGKDSSVQLQAVLLASDCNPRWLTKHIPIL 168
           VTR LERM P++    S Q     S +     +   V++Q +L+ASD NP+WLTKH+P L
Sbjct: 72  VTRALERMLPATEMRGSPQKPACSSIISTNHRRPPPVRIQVILIASDSNPKWLTKHLPSL 131

Query: 169 ASSRNVPLIFVKDKKGGSLRLGELVNLKTAIAIGVKANGSGINKLVAEILESSNSVGDTE 348
           ASSR +P+IFV+DKKGGSLRLGELVNLKTAIA+G+KA G+ IN++V E+L   + +    
Sbjct: 132 ASSRKIPVIFVRDKKGGSLRLGELVNLKTAIALGIKAKGNSINQIVEEMLCGGDVMNLET 191

Query: 349 SCE 357
            C+
Sbjct: 192 ECQ 194


>ref|NP_001152178.1| ribonuclease P [Zea mays] gi|195653597|gb|ACG46266.1| ribonuclease
           P [Zea mays]
          Length = 186

 Score =  119 bits (297), Expect = 5e-25
 Identities = 66/117 (56%), Positives = 85/117 (72%), Gaps = 3/117 (2%)
 Frame = +1

Query: 1   VTRVLERMSPSSVSENSAQDST---LECGGGKDSSVQLQAVLLASDCNPRWLTKHIPILA 171
           VTRVLERM P SV+ + AQ S+      G  +   V LQAVL+A+DCNP+WLTKHIP LA
Sbjct: 69  VTRVLERM-PHSVTAHPAQMSSGAPTVSGRRQAPLVPLQAVLVAADCNPKWLTKHIPTLA 127

Query: 172 SSRNVPLIFVKDKKGGSLRLGELVNLKTAIAIGVKANGSGINKLVAEILESSNSVGD 342
           S+R VP++ VKD KGGS+RLG +VN++TA+AIGVKA  S +NK + E L+ S  V +
Sbjct: 128 STRQVPVLCVKDNKGGSVRLGHVVNVRTALAIGVKAKDSVLNKTIDEFLKDSKLVAN 184


Top