BLASTX nr result

ID: Cimicifuga21_contig00028250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028250
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522091.1| conserved hypothetical protein [Ricinus comm...    59   3e-07
emb|CAN75064.1| hypothetical protein VITISV_025472 [Vitis vinifera]    58   9e-07

>ref|XP_002522091.1| conserved hypothetical protein [Ricinus communis]
           gi|223538690|gb|EEF40291.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 868

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 18/153 (11%)
 Frame = -2

Query: 471 VSETKP----EYTQSTTSKSKPRFFVRSKIIPFLLVFAIACLFFPVTDTPGFSPFANKGQ 304
           VSE  P    E   +    SKP FF R+K    L V AIACL+  V+++P   P      
Sbjct: 339 VSEPNPINASEVAVTAKRVSKPNFFTRTKFTALLFVLAIACLWASVSNSPVMDPSVLNNL 398

Query: 303 TFDF----DRSAEFAKAHLAELASNIKLWSAKTVSYLSKVISIPRVVEEPGPFYFSNMTA 136
           +F          EF + +L  LA   + W  + +SY+  +I        P P  F+N++ 
Sbjct: 399 SFSNLYVPPEITEFTRDNLEGLAQKFRQWLYEYLSYIHSLIISFGEQRRPAPLQFANLST 458

Query: 135 FNKEHLMYD----------EYRFKELGNVETED 67
             K+ L+ +          +Y   ELG ++ E+
Sbjct: 459 LLKDDLVDNNFILAGHSTFKYESNELGPIKEEE 491


>emb|CAN75064.1| hypothetical protein VITISV_025472 [Vitis vinifera]
          Length = 1013

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 53/165 (32%), Positives = 73/165 (44%), Gaps = 33/165 (20%)
 Frame = -2

Query: 432 SKSKPRFFVRSKIIPFLLVFAIACLFFPVTDTPGFSPFANK--GQTFDFDRS------AE 277
           SKS   F  R K I  LL+  + CL  P+TD+P      +   G+   F +       AE
Sbjct: 390 SKSYSSF--RLKPIFVLLLLLVGCLCIPITDSPFIISVIDSSVGEESSFTKLYEPAELAE 447

Query: 276 FAKAHLAELASNIKLWSAKTVSYLSKVISIPRVVEEPGPFYFSNMT-------------A 136
           FA+ +   L  N +LWSA TVSY SK+I I +   E G   F N T              
Sbjct: 448 FARTNFDGLTRNFRLWSANTVSYFSKMIPIVKETNELGFLRFGNFTDSQVDIVGGAYLVK 507

Query: 135 FNKEHLMYDE-------YRFKELGNVETE-----DENDQVDIELE 37
            N+++L +          + KE GN+ TE     +E  QV+ E E
Sbjct: 508 ENQQNLQWPMKELEVGIVQMKEQGNMVTEAYEKVEEASQVNPEFE 552


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